Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC23.71■■□□□ 1.39
TRIM50Q86XT4 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
TRIM50Q86XT4 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC23.71■■□□□ 1.39
TRIM50Q86XT4 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC23.7■■□□□ 1.39
TRIM50Q86XT4 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC23.7■■□□□ 1.38
TRIM50Q86XT4 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
TRIM50Q86XT4 APTR-203ENST00000430801 583 ntTSL 5 BASIC23.7■■□□□ 1.38
TRIM50Q86XT4 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC23.7■■□□□ 1.38
TRIM50Q86XT4 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC23.7■■□□□ 1.38
TRIM50Q86XT4 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
TRIM50Q86XT4 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
TRIM50Q86XT4 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
TRIM50Q86XT4 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
TRIM50Q86XT4 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
TRIM50Q86XT4 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
TRIM50Q86XT4 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC23.69■■□□□ 1.38
TRIM50Q86XT4 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC23.69■■□□□ 1.38
TRIM50Q86XT4 BMP1-204ENST00000397814 836 ntTSL 4 BASIC23.69■■□□□ 1.38
TRIM50Q86XT4 RNF146-206ENST00000480444 843 ntTSL 2 BASIC23.69■■□□□ 1.38
TRIM50Q86XT4 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC23.69■■□□□ 1.38
TRIM50Q86XT4 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
TRIM50Q86XT4 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
TRIM50Q86XT4 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC23.69■■□□□ 1.38
TRIM50Q86XT4 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
TRIM50Q86XT4 AC026471.6-201ENST00000622954 1905 ntBASIC23.69■■□□□ 1.38
TRIM50Q86XT4 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC23.68■■□□□ 1.38
TRIM50Q86XT4 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
TRIM50Q86XT4 AC003102.1-202ENST00000563394 1796 ntBASIC23.68■■□□□ 1.38
TRIM50Q86XT4 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
TRIM50Q86XT4 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC23.68■■□□□ 1.38
TRIM50Q86XT4 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
TRIM50Q86XT4 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
TRIM50Q86XT4 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC23.68■■□□□ 1.38
TRIM50Q86XT4 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC23.68■■□□□ 1.38
TRIM50Q86XT4 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC23.68■■□□□ 1.38
TRIM50Q86XT4 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
TRIM50Q86XT4 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC23.67■■□□□ 1.38
TRIM50Q86XT4 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
TRIM50Q86XT4 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC23.67■■□□□ 1.38
TRIM50Q86XT4 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
TRIM50Q86XT4 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC23.67■■□□□ 1.38
TRIM50Q86XT4 OAS3-207ENST00000551007 998 ntTSL 2 BASIC23.67■■□□□ 1.38
TRIM50Q86XT4 AL138781.1-201ENST00000566567 1274 ntBASIC23.67■■□□□ 1.38
TRIM50Q86XT4 AC142086.2-201ENST00000569753 217 ntBASIC23.67■■□□□ 1.38
TRIM50Q86XT4 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
TRIM50Q86XT4 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
TRIM50Q86XT4 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC23.67■■□□□ 1.38
TRIM50Q86XT4 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC23.67■■□□□ 1.38
TRIM50Q86XT4 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
TRIM50Q86XT4 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC23.67■■□□□ 1.38
TRIM50Q86XT4 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC23.66■■□□□ 1.38
TRIM50Q86XT4 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC23.66■■□□□ 1.38
TRIM50Q86XT4 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
TRIM50Q86XT4 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
TRIM50Q86XT4 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
TRIM50Q86XT4 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC23.66■■□□□ 1.38
TRIM50Q86XT4 APTR-205ENST00000447009 902 ntTSL 2 BASIC23.66■■□□□ 1.38
TRIM50Q86XT4 TERF1P5-201ENST00000477545 1207 ntBASIC23.66■■□□□ 1.38
TRIM50Q86XT4 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC23.66■■□□□ 1.38
TRIM50Q86XT4 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC23.66■■□□□ 1.38
TRIM50Q86XT4 AC013268.1-206ENST00000638368 961 ntBASIC23.66■■□□□ 1.38
TRIM50Q86XT4 AC112229.1-201ENST00000639295 961 ntBASIC23.66■■□□□ 1.38
TRIM50Q86XT4 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC23.66■■□□□ 1.38
TRIM50Q86XT4 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
TRIM50Q86XT4 TERT-206ENST00000508104 2486 ntTSL 5 BASIC23.66■■□□□ 1.38
TRIM50Q86XT4 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC23.65■■□□□ 1.38
TRIM50Q86XT4 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
TRIM50Q86XT4 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
TRIM50Q86XT4 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC23.65■■□□□ 1.38
TRIM50Q86XT4 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
TRIM50Q86XT4 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC23.65■■□□□ 1.38
TRIM50Q86XT4 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC23.65■■□□□ 1.38
TRIM50Q86XT4 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC23.65■■□□□ 1.38
TRIM50Q86XT4 SLC7A5P1-201ENST00000568957 537 ntBASIC23.65■■□□□ 1.38
TRIM50Q86XT4 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
TRIM50Q86XT4 AC092053.2-201ENST00000640557 1818 ntBASIC23.65■■□□□ 1.38
TRIM50Q86XT4 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
TRIM50Q86XT4 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
TRIM50Q86XT4 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
TRIM50Q86XT4 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC23.64■■□□□ 1.38
TRIM50Q86XT4 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC23.64■■□□□ 1.38
TRIM50Q86XT4 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
TRIM50Q86XT4 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC23.64■■□□□ 1.38
TRIM50Q86XT4 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC23.64■■□□□ 1.38
TRIM50Q86XT4 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC23.64■■□□□ 1.37
TRIM50Q86XT4 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC23.64■■□□□ 1.37
TRIM50Q86XT4 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
TRIM50Q86XT4 AC127496.7-201ENST00000625110 1798 ntBASIC23.64■■□□□ 1.37
TRIM50Q86XT4 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
TRIM50Q86XT4 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
TRIM50Q86XT4 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC23.64■■□□□ 1.37
TRIM50Q86XT4 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
TRIM50Q86XT4 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC23.63■■□□□ 1.37
TRIM50Q86XT4 RARG-204ENST00000543726 1779 ntTSL 2 BASIC23.63■■□□□ 1.37
TRIM50Q86XT4 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC23.63■■□□□ 1.37
TRIM50Q86XT4 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
TRIM50Q86XT4 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
TRIM50Q86XT4 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC23.63■■□□□ 1.37
TRIM50Q86XT4 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
TRIM50Q86XT4 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms