Protein–RNA interactions for Protein: Q6ZNA4

RNF111, E3 ubiquitin-protein ligase Arkadia, humanhuman

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF111Q6ZNA4 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC20.54■□□□□ 0.88
RNF111Q6ZNA4 AC133561.4-201ENST00000566112 224 ntBASIC20.54■□□□□ 0.88
RNF111Q6ZNA4 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
RNF111Q6ZNA4 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RNF111Q6ZNA4 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RNF111Q6ZNA4 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RNF111Q6ZNA4 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RNF111Q6ZNA4 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
RNF111Q6ZNA4 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
RNF111Q6ZNA4 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RNF111Q6ZNA4 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RNF111Q6ZNA4 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RNF111Q6ZNA4 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RNF111Q6ZNA4 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
RNF111Q6ZNA4 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RNF111Q6ZNA4 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC20.53■□□□□ 0.88
RNF111Q6ZNA4 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC20.53■□□□□ 0.88
RNF111Q6ZNA4 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RNF111Q6ZNA4 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
RNF111Q6ZNA4 EDA-201ENST00000338901 1233 ntBASIC20.53■□□□□ 0.88
RNF111Q6ZNA4 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
RNF111Q6ZNA4 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC20.53■□□□□ 0.88
RNF111Q6ZNA4 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC20.53■□□□□ 0.88
RNF111Q6ZNA4 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
RNF111Q6ZNA4 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RNF111Q6ZNA4 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RNF111Q6ZNA4 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC20.53■□□□□ 0.88
RNF111Q6ZNA4 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RNF111Q6ZNA4 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
RNF111Q6ZNA4 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
RNF111Q6ZNA4 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
RNF111Q6ZNA4 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
RNF111Q6ZNA4 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC20.52■□□□□ 0.88
RNF111Q6ZNA4 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC20.52■□□□□ 0.88
RNF111Q6ZNA4 GRAMD4P4-201ENST00000613563 1115 ntBASIC20.52■□□□□ 0.88
RNF111Q6ZNA4 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC20.52■□□□□ 0.88
RNF111Q6ZNA4 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
RNF111Q6ZNA4 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RNF111Q6ZNA4 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC20.52■□□□□ 0.88
RNF111Q6ZNA4 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC20.52■□□□□ 0.87
RNF111Q6ZNA4 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
RNF111Q6ZNA4 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
RNF111Q6ZNA4 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC20.52■□□□□ 0.87
RNF111Q6ZNA4 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC20.52■□□□□ 0.87
RNF111Q6ZNA4 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RNF111Q6ZNA4 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RNF111Q6ZNA4 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
RNF111Q6ZNA4 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
RNF111Q6ZNA4 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RNF111Q6ZNA4 OR2I1P-207ENST00000453522 948 ntBASIC20.51■□□□□ 0.87
RNF111Q6ZNA4 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC20.51■□□□□ 0.87
RNF111Q6ZNA4 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC20.51■□□□□ 0.87
RNF111Q6ZNA4 AL355001.2-201ENST00000620617 1191 ntBASIC20.51■□□□□ 0.87
RNF111Q6ZNA4 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
RNF111Q6ZNA4 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RNF111Q6ZNA4 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
RNF111Q6ZNA4 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC20.51■□□□□ 0.87
RNF111Q6ZNA4 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
RNF111Q6ZNA4 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
RNF111Q6ZNA4 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RNF111Q6ZNA4 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
RNF111Q6ZNA4 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC20.5■□□□□ 0.87
RNF111Q6ZNA4 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RNF111Q6ZNA4 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
RNF111Q6ZNA4 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RNF111Q6ZNA4 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC20.5■□□□□ 0.87
RNF111Q6ZNA4 MIR638-201ENST00000385237 100 ntBASIC20.5■□□□□ 0.87
RNF111Q6ZNA4 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC20.5■□□□□ 0.87
RNF111Q6ZNA4 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
RNF111Q6ZNA4 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RNF111Q6ZNA4 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
RNF111Q6ZNA4 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RNF111Q6ZNA4 LINC01960-201ENST00000563759 1884 ntBASIC20.5■□□□□ 0.87
RNF111Q6ZNA4 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RNF111Q6ZNA4 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC20.49■□□□□ 0.87
RNF111Q6ZNA4 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
RNF111Q6ZNA4 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RNF111Q6ZNA4 FEM1AP1-201ENST00000431297 1995 ntBASIC20.49■□□□□ 0.87
RNF111Q6ZNA4 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC20.49■□□□□ 0.87
RNF111Q6ZNA4 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
RNF111Q6ZNA4 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC20.49■□□□□ 0.87
RNF111Q6ZNA4 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RNF111Q6ZNA4 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RNF111Q6ZNA4 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
RNF111Q6ZNA4 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
RNF111Q6ZNA4 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RNF111Q6ZNA4 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RNF111Q6ZNA4 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
RNF111Q6ZNA4 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
RNF111Q6ZNA4 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RNF111Q6ZNA4 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC20.48■□□□□ 0.87
RNF111Q6ZNA4 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC20.48■□□□□ 0.87
RNF111Q6ZNA4 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC20.48■□□□□ 0.87
RNF111Q6ZNA4 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC20.48■□□□□ 0.87
RNF111Q6ZNA4 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
RNF111Q6ZNA4 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
RNF111Q6ZNA4 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RNF111Q6ZNA4 SNX3-202ENST00000349379 890 ntTSL 2 BASIC20.48■□□□□ 0.87
RNF111Q6ZNA4 BX842568.3-201ENST00000418104 571 ntBASIC20.48■□□□□ 0.87
RNF111Q6ZNA4 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC20.48■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 63.1 ms