Protein–RNA interactions for Protein: Q6FI13

HIST2H2AA3, Histone H2A type 2-A, humanhuman

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H2AA3Q6FI13 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC20.48■□□□□ 0.87
HIST2H2AA3Q6FI13 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
HIST2H2AA3Q6FI13 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC20.48■□□□□ 0.87
HIST2H2AA3Q6FI13 AC012414.1-201ENST00000556676 535 ntBASIC20.48■□□□□ 0.87
HIST2H2AA3Q6FI13 AL358852.1-201ENST00000623174 1268 ntBASIC20.48■□□□□ 0.87
HIST2H2AA3Q6FI13 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC20.48■□□□□ 0.87
HIST2H2AA3Q6FI13 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
HIST2H2AA3Q6FI13 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
HIST2H2AA3Q6FI13 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC20.47■□□□□ 0.87
HIST2H2AA3Q6FI13 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
HIST2H2AA3Q6FI13 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
HIST2H2AA3Q6FI13 AC003102.1-202ENST00000563394 1796 ntBASIC20.47■□□□□ 0.87
HIST2H2AA3Q6FI13 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC20.47■□□□□ 0.87
HIST2H2AA3Q6FI13 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
HIST2H2AA3Q6FI13 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
HIST2H2AA3Q6FI13 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
HIST2H2AA3Q6FI13 NME4-202ENST00000382940 766 ntTSL 3 BASIC20.47■□□□□ 0.87
HIST2H2AA3Q6FI13 AC105265.2-201ENST00000467189 838 ntBASIC20.47■□□□□ 0.87
HIST2H2AA3Q6FI13 RHOF-204ENST00000537265 699 ntTSL 2 BASIC20.47■□□□□ 0.87
HIST2H2AA3Q6FI13 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC20.47■□□□□ 0.87
HIST2H2AA3Q6FI13 NME4-211ENST00000620944 1193 ntTSL 2 BASIC20.47■□□□□ 0.87
HIST2H2AA3Q6FI13 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC20.47■□□□□ 0.87
HIST2H2AA3Q6FI13 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
HIST2H2AA3Q6FI13 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
HIST2H2AA3Q6FI13 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC20.47■□□□□ 0.87
HIST2H2AA3Q6FI13 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
HIST2H2AA3Q6FI13 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
HIST2H2AA3Q6FI13 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC20.47■□□□□ 0.87
HIST2H2AA3Q6FI13 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
HIST2H2AA3Q6FI13 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
HIST2H2AA3Q6FI13 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
HIST2H2AA3Q6FI13 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
HIST2H2AA3Q6FI13 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC20.46■□□□□ 0.87
HIST2H2AA3Q6FI13 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
HIST2H2AA3Q6FI13 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
HIST2H2AA3Q6FI13 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC20.46■□□□□ 0.87
HIST2H2AA3Q6FI13 FXN-202ENST00000396364 980 ntTSL 5 BASIC20.46■□□□□ 0.87
HIST2H2AA3Q6FI13 MTURN-203ENST00000409688 843 ntTSL 2 BASIC20.46■□□□□ 0.87
HIST2H2AA3Q6FI13 STOX2-205ENST00000513034 807 ntTSL 3 BASIC20.46■□□□□ 0.87
HIST2H2AA3Q6FI13 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC20.46■□□□□ 0.87
HIST2H2AA3Q6FI13 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
HIST2H2AA3Q6FI13 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
HIST2H2AA3Q6FI13 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC20.46■□□□□ 0.87
HIST2H2AA3Q6FI13 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
HIST2H2AA3Q6FI13 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
HIST2H2AA3Q6FI13 AC005224.4-201ENST00000583262 1652 ntBASIC20.45■□□□□ 0.86
HIST2H2AA3Q6FI13 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
HIST2H2AA3Q6FI13 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC20.45■□□□□ 0.86
HIST2H2AA3Q6FI13 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
HIST2H2AA3Q6FI13 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC20.45■□□□□ 0.86
HIST2H2AA3Q6FI13 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
HIST2H2AA3Q6FI13 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
HIST2H2AA3Q6FI13 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC20.45■□□□□ 0.86
HIST2H2AA3Q6FI13 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
HIST2H2AA3Q6FI13 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
HIST2H2AA3Q6FI13 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
HIST2H2AA3Q6FI13 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
HIST2H2AA3Q6FI13 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC20.44■□□□□ 0.86
HIST2H2AA3Q6FI13 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
HIST2H2AA3Q6FI13 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
HIST2H2AA3Q6FI13 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC20.44■□□□□ 0.86
HIST2H2AA3Q6FI13 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
HIST2H2AA3Q6FI13 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
HIST2H2AA3Q6FI13 PXK-203ENST00000383715 1756 ntTSL 5 BASIC20.44■□□□□ 0.86
HIST2H2AA3Q6FI13 CLDN5-201ENST00000403084 2357 ntBASIC20.44■□□□□ 0.86
HIST2H2AA3Q6FI13 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
HIST2H2AA3Q6FI13 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC20.44■□□□□ 0.86
HIST2H2AA3Q6FI13 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC20.44■□□□□ 0.86
HIST2H2AA3Q6FI13 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
HIST2H2AA3Q6FI13 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
HIST2H2AA3Q6FI13 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
HIST2H2AA3Q6FI13 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
HIST2H2AA3Q6FI13 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
HIST2H2AA3Q6FI13 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC20.43■□□□□ 0.86
HIST2H2AA3Q6FI13 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
HIST2H2AA3Q6FI13 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
HIST2H2AA3Q6FI13 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC20.43■□□□□ 0.86
HIST2H2AA3Q6FI13 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
HIST2H2AA3Q6FI13 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
HIST2H2AA3Q6FI13 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC20.43■□□□□ 0.86
HIST2H2AA3Q6FI13 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
HIST2H2AA3Q6FI13 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
HIST2H2AA3Q6FI13 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC20.43■□□□□ 0.86
HIST2H2AA3Q6FI13 MFF-203ENST00000349901 1716 ntTSL 2 BASIC20.43■□□□□ 0.86
HIST2H2AA3Q6FI13 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC20.43■□□□□ 0.86
HIST2H2AA3Q6FI13 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
HIST2H2AA3Q6FI13 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC20.43■□□□□ 0.86
HIST2H2AA3Q6FI13 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
HIST2H2AA3Q6FI13 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
HIST2H2AA3Q6FI13 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC20.43■□□□□ 0.86
HIST2H2AA3Q6FI13 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
HIST2H2AA3Q6FI13 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
HIST2H2AA3Q6FI13 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
HIST2H2AA3Q6FI13 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
HIST2H2AA3Q6FI13 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
HIST2H2AA3Q6FI13 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC20.42■□□□□ 0.86
HIST2H2AA3Q6FI13 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
HIST2H2AA3Q6FI13 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
HIST2H2AA3Q6FI13 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC20.42■□□□□ 0.86
HIST2H2AA3Q6FI13 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms