Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 AC112229.1-201ENST00000639295 961 ntBASIC24.92■■□□□ 1.58
SHROOM1Q2M3G4 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
SHROOM1Q2M3G4 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC24.92■■□□□ 1.58
SHROOM1Q2M3G4 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC24.92■■□□□ 1.58
SHROOM1Q2M3G4 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC24.92■■□□□ 1.58
SHROOM1Q2M3G4 AC061975.6-201ENST00000579045 1553 ntBASIC24.92■■□□□ 1.58
SHROOM1Q2M3G4 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
SHROOM1Q2M3G4 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC24.91■■□□□ 1.58
SHROOM1Q2M3G4 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
SHROOM1Q2M3G4 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC24.91■■□□□ 1.58
SHROOM1Q2M3G4 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC24.91■■□□□ 1.58
SHROOM1Q2M3G4 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC24.91■■□□□ 1.58
SHROOM1Q2M3G4 PFKL-212ENST00000628044 129 ntTSL 3 BASIC24.91■■□□□ 1.58
SHROOM1Q2M3G4 TERT-206ENST00000508104 2486 ntTSL 5 BASIC24.91■■□□□ 1.58
SHROOM1Q2M3G4 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC24.91■■□□□ 1.58
SHROOM1Q2M3G4 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC24.91■■□□□ 1.58
SHROOM1Q2M3G4 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
SHROOM1Q2M3G4 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
SHROOM1Q2M3G4 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
SHROOM1Q2M3G4 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
SHROOM1Q2M3G4 SLC29A4P1-201ENST00000398760 971 ntBASIC24.9■■□□□ 1.58
SHROOM1Q2M3G4 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC24.9■■□□□ 1.58
SHROOM1Q2M3G4 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC24.9■■□□□ 1.58
SHROOM1Q2M3G4 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC24.9■■□□□ 1.58
SHROOM1Q2M3G4 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
SHROOM1Q2M3G4 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC24.9■■□□□ 1.58
SHROOM1Q2M3G4 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC24.9■■□□□ 1.58
SHROOM1Q2M3G4 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC24.89■■□□□ 1.58
SHROOM1Q2M3G4 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC24.89■■□□□ 1.58
SHROOM1Q2M3G4 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
SHROOM1Q2M3G4 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
SHROOM1Q2M3G4 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC24.89■■□□□ 1.58
SHROOM1Q2M3G4 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
SHROOM1Q2M3G4 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC24.89■■□□□ 1.58
SHROOM1Q2M3G4 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC24.89■■□□□ 1.58
SHROOM1Q2M3G4 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
SHROOM1Q2M3G4 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC24.89■■□□□ 1.58
SHROOM1Q2M3G4 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC24.89■■□□□ 1.58
SHROOM1Q2M3G4 AC016405.3-201ENST00000607710 860 ntBASIC24.89■■□□□ 1.58
SHROOM1Q2M3G4 FGF8-207ENST00000618991 856 ntTSL 3 BASIC24.89■■□□□ 1.58
SHROOM1Q2M3G4 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC24.89■■□□□ 1.58
SHROOM1Q2M3G4 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC24.89■■□□□ 1.58
SHROOM1Q2M3G4 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC24.89■■□□□ 1.58
SHROOM1Q2M3G4 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC24.89■■□□□ 1.57
SHROOM1Q2M3G4 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC24.89■■□□□ 1.57
SHROOM1Q2M3G4 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC24.89■■□□□ 1.57
SHROOM1Q2M3G4 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC24.89■■□□□ 1.57
SHROOM1Q2M3G4 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC24.88■■□□□ 1.57
SHROOM1Q2M3G4 RARG-204ENST00000543726 1779 ntTSL 2 BASIC24.88■■□□□ 1.57
SHROOM1Q2M3G4 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
SHROOM1Q2M3G4 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
SHROOM1Q2M3G4 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
SHROOM1Q2M3G4 PHB2-213ENST00000546111 858 ntTSL 2 BASIC24.88■■□□□ 1.57
SHROOM1Q2M3G4 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC24.88■■□□□ 1.57
SHROOM1Q2M3G4 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
SHROOM1Q2M3G4 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
SHROOM1Q2M3G4 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
SHROOM1Q2M3G4 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC24.87■■□□□ 1.57
SHROOM1Q2M3G4 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC24.87■■□□□ 1.57
SHROOM1Q2M3G4 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
SHROOM1Q2M3G4 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC24.87■■□□□ 1.57
SHROOM1Q2M3G4 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC24.87■■□□□ 1.57
SHROOM1Q2M3G4 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC24.87■■□□□ 1.57
SHROOM1Q2M3G4 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
SHROOM1Q2M3G4 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
SHROOM1Q2M3G4 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
SHROOM1Q2M3G4 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC24.86■■□□□ 1.57
SHROOM1Q2M3G4 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
SHROOM1Q2M3G4 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
SHROOM1Q2M3G4 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC24.86■■□□□ 1.57
SHROOM1Q2M3G4 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC24.86■■□□□ 1.57
SHROOM1Q2M3G4 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
SHROOM1Q2M3G4 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC24.86■■□□□ 1.57
SHROOM1Q2M3G4 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
SHROOM1Q2M3G4 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC24.86■■□□□ 1.57
SHROOM1Q2M3G4 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
SHROOM1Q2M3G4 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
SHROOM1Q2M3G4 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC24.85■■□□□ 1.57
SHROOM1Q2M3G4 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC24.85■■□□□ 1.57
SHROOM1Q2M3G4 AC007322.4-201ENST00000509611 723 ntBASIC24.85■■□□□ 1.57
SHROOM1Q2M3G4 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC24.85■■□□□ 1.57
SHROOM1Q2M3G4 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC24.85■■□□□ 1.57
SHROOM1Q2M3G4 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC24.85■■□□□ 1.57
SHROOM1Q2M3G4 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
SHROOM1Q2M3G4 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
SHROOM1Q2M3G4 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC24.85■■□□□ 1.57
SHROOM1Q2M3G4 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC24.85■■□□□ 1.57
SHROOM1Q2M3G4 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC24.85■■□□□ 1.57
SHROOM1Q2M3G4 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
SHROOM1Q2M3G4 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
SHROOM1Q2M3G4 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
SHROOM1Q2M3G4 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC24.84■■□□□ 1.57
SHROOM1Q2M3G4 MIPEPP3-201ENST00000412105 444 ntBASIC24.84■■□□□ 1.57
SHROOM1Q2M3G4 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC24.84■■□□□ 1.57
SHROOM1Q2M3G4 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC24.84■■□□□ 1.57
SHROOM1Q2M3G4 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
SHROOM1Q2M3G4 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC24.84■■□□□ 1.57
SHROOM1Q2M3G4 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
SHROOM1Q2M3G4 AC010542.4-201ENST00000563151 1910 ntBASIC24.84■■□□□ 1.57
SHROOM1Q2M3G4 AC092053.2-201ENST00000640557 1818 ntBASIC24.84■■□□□ 1.57
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms