Protein–RNA interactions for Protein: P62701

RPS4X, 40S ribosomal protein S4, X isoform, humanhuman

Known RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4XP62701 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RPS4XP62701 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
RPS4XP62701 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RPS4XP62701 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC19.15■□□□□ 0.66
RPS4XP62701 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC19.15■□□□□ 0.66
RPS4XP62701 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
RPS4XP62701 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC19.15■□□□□ 0.66
RPS4XP62701 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RPS4XP62701 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC19.15■□□□□ 0.66
RPS4XP62701 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
RPS4XP62701 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC19.14■□□□□ 0.66
RPS4XP62701 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
RPS4XP62701 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
RPS4XP62701 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
RPS4XP62701 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
RPS4XP62701 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC19.14■□□□□ 0.65
RPS4XP62701 AICDA-202ENST00000537228 667 ntTSL 5 BASIC19.14■□□□□ 0.65
RPS4XP62701 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
RPS4XP62701 AF106564.1-201ENST00000607058 2553 ntBASIC19.14■□□□□ 0.65
RPS4XP62701 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
RPS4XP62701 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RPS4XP62701 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RPS4XP62701 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC19.14■□□□□ 0.65
RPS4XP62701 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
RPS4XP62701 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RPS4XP62701 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RPS4XP62701 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RPS4XP62701 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RPS4XP62701 AL024507.2-201ENST00000606070 2574 ntBASIC19.13■□□□□ 0.65
RPS4XP62701 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RPS4XP62701 NME4-202ENST00000382940 766 ntTSL 3 BASIC19.13■□□□□ 0.65
RPS4XP62701 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC19.13■□□□□ 0.65
RPS4XP62701 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC19.13■□□□□ 0.65
RPS4XP62701 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC19.13■□□□□ 0.65
RPS4XP62701 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RPS4XP62701 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC19.13■□□□□ 0.65
RPS4XP62701 NME4-211ENST00000620944 1193 ntTSL 2 BASIC19.13■□□□□ 0.65
RPS4XP62701 TSPY26P-201ENST00000476365 1326 ntBASIC19.13■□□□□ 0.65
RPS4XP62701 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RPS4XP62701 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC19.13■□□□□ 0.65
RPS4XP62701 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC19.13■□□□□ 0.65
RPS4XP62701 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RPS4XP62701 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RPS4XP62701 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC19.13■□□□□ 0.65
RPS4XP62701 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RPS4XP62701 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
RPS4XP62701 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC19.12■□□□□ 0.65
RPS4XP62701 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC19.12■□□□□ 0.65
RPS4XP62701 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
RPS4XP62701 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
RPS4XP62701 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
RPS4XP62701 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC19.12■□□□□ 0.65
RPS4XP62701 AC034268.1-201ENST00000441047 882 ntBASIC19.12■□□□□ 0.65
RPS4XP62701 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC19.12■□□□□ 0.65
RPS4XP62701 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC19.11■□□□□ 0.65
RPS4XP62701 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC19.11■□□□□ 0.65
RPS4XP62701 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RPS4XP62701 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC19.11■□□□□ 0.65
RPS4XP62701 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
RPS4XP62701 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RPS4XP62701 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RPS4XP62701 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RPS4XP62701 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC19.11■□□□□ 0.65
RPS4XP62701 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC19.11■□□□□ 0.65
RPS4XP62701 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RPS4XP62701 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RPS4XP62701 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RPS4XP62701 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RPS4XP62701 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RPS4XP62701 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RPS4XP62701 DYM-203ENST00000442713 2147 ntTSL 2 BASIC19.1■□□□□ 0.65
RPS4XP62701 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC19.1■□□□□ 0.65
RPS4XP62701 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC19.1■□□□□ 0.65
RPS4XP62701 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC19.1■□□□□ 0.65
RPS4XP62701 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RPS4XP62701 YBX1P1-201ENST00000445822 960 ntBASIC19.1■□□□□ 0.65
RPS4XP62701 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RPS4XP62701 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC19.1■□□□□ 0.65
RPS4XP62701 ASL-203ENST00000380839 1765 ntTSL 5 BASIC19.1■□□□□ 0.65
RPS4XP62701 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RPS4XP62701 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RPS4XP62701 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RPS4XP62701 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC19.1■□□□□ 0.65
RPS4XP62701 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RPS4XP62701 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RPS4XP62701 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
RPS4XP62701 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
RPS4XP62701 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC19.09■□□□□ 0.65
RPS4XP62701 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
RPS4XP62701 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RPS4XP62701 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC19.09■□□□□ 0.65
RPS4XP62701 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC19.09■□□□□ 0.65
RPS4XP62701 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
RPS4XP62701 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC19.09■□□□□ 0.65
RPS4XP62701 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
RPS4XP62701 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
RPS4XP62701 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
RPS4XP62701 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
RPS4XP62701 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
RPS4XP62701 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC19.08■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms