Protein–RNA interactions for Protein: P61020

RAB5B, Ras-related protein Rab-5B, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5BP61020 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
RAB5BP61020 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
RAB5BP61020 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
RAB5BP61020 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
RAB5BP61020 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC16.66■□□□□ 0.26
RAB5BP61020 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC16.66■□□□□ 0.26
RAB5BP61020 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
RAB5BP61020 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
RAB5BP61020 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
RAB5BP61020 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC16.66■□□□□ 0.26
RAB5BP61020 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RAB5BP61020 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
RAB5BP61020 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
RAB5BP61020 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RAB5BP61020 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
RAB5BP61020 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
RAB5BP61020 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC16.65■□□□□ 0.26
RAB5BP61020 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RAB5BP61020 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC16.65■□□□□ 0.26
RAB5BP61020 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RAB5BP61020 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC16.65■□□□□ 0.26
RAB5BP61020 AIRN-201ENST00000601203 4374 ntBASIC16.65■□□□□ 0.26
RAB5BP61020 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC16.65■□□□□ 0.26
RAB5BP61020 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RAB5BP61020 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RAB5BP61020 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RAB5BP61020 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RAB5BP61020 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC16.65■□□□□ 0.26
RAB5BP61020 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
RAB5BP61020 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RAB5BP61020 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC16.65■□□□□ 0.26
RAB5BP61020 GOLGA2P6-201ENST00000340929 2049 ntBASIC16.65■□□□□ 0.26
RAB5BP61020 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
RAB5BP61020 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC16.65■□□□□ 0.26
RAB5BP61020 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC16.65■□□□□ 0.26
RAB5BP61020 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC16.64■□□□□ 0.26
RAB5BP61020 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RAB5BP61020 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC16.64■□□□□ 0.25
RAB5BP61020 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC16.64■□□□□ 0.25
RAB5BP61020 AL359504.2-201ENST00000605506 1601 ntBASIC16.64■□□□□ 0.25
RAB5BP61020 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC16.64■□□□□ 0.25
RAB5BP61020 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RAB5BP61020 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RAB5BP61020 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC16.64■□□□□ 0.25
RAB5BP61020 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RAB5BP61020 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
RAB5BP61020 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC16.64■□□□□ 0.25
RAB5BP61020 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
RAB5BP61020 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
RAB5BP61020 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RAB5BP61020 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RAB5BP61020 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
RAB5BP61020 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RAB5BP61020 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
RAB5BP61020 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RAB5BP61020 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC16.64■□□□□ 0.25
RAB5BP61020 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RAB5BP61020 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RAB5BP61020 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
RAB5BP61020 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RAB5BP61020 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RAB5BP61020 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
RAB5BP61020 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
RAB5BP61020 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
RAB5BP61020 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RAB5BP61020 BID-204ENST00000399767 2129 ntTSL 2 BASIC16.63■□□□□ 0.25
RAB5BP61020 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RAB5BP61020 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RAB5BP61020 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
RAB5BP61020 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RAB5BP61020 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC16.63■□□□□ 0.25
RAB5BP61020 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
RAB5BP61020 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RAB5BP61020 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC16.63■□□□□ 0.25
RAB5BP61020 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RAB5BP61020 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC16.63■□□□□ 0.25
RAB5BP61020 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RAB5BP61020 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
RAB5BP61020 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC16.63■□□□□ 0.25
RAB5BP61020 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RAB5BP61020 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
RAB5BP61020 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC16.63■□□□□ 0.25
RAB5BP61020 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RAB5BP61020 AP000974.1-201ENST00000623909 2387 ntBASIC16.63■□□□□ 0.25
RAB5BP61020 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RAB5BP61020 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RAB5BP61020 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC16.62■□□□□ 0.25
RAB5BP61020 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC16.62■□□□□ 0.25
RAB5BP61020 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RAB5BP61020 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
RAB5BP61020 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RAB5BP61020 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RAB5BP61020 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RAB5BP61020 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
RAB5BP61020 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC16.62■□□□□ 0.25
RAB5BP61020 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RAB5BP61020 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
RAB5BP61020 CAHM-201ENST00000604200 896 ntBASIC16.62■□□□□ 0.25
RAB5BP61020 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC16.62■□□□□ 0.25
RAB5BP61020 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms