Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
AP3S2P59780 DYM-203ENST00000442713 2147 ntTSL 2 BASIC18.19■□□□□ 0.5
AP3S2P59780 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
AP3S2P59780 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
AP3S2P59780 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
AP3S2P59780 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
AP3S2P59780 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC18.18■□□□□ 0.5
AP3S2P59780 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC18.18■□□□□ 0.5
AP3S2P59780 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC18.18■□□□□ 0.5
AP3S2P59780 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC18.18■□□□□ 0.5
AP3S2P59780 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
AP3S2P59780 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC18.18■□□□□ 0.5
AP3S2P59780 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
AP3S2P59780 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
AP3S2P59780 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
AP3S2P59780 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
AP3S2P59780 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
AP3S2P59780 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC18.18■□□□□ 0.5
AP3S2P59780 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
AP3S2P59780 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
AP3S2P59780 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
AP3S2P59780 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
AP3S2P59780 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC18.17■□□□□ 0.5
AP3S2P59780 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC18.17■□□□□ 0.5
AP3S2P59780 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC18.17■□□□□ 0.5
AP3S2P59780 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC18.17■□□□□ 0.5
AP3S2P59780 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC18.17■□□□□ 0.5
AP3S2P59780 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC18.17■□□□□ 0.5
AP3S2P59780 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
AP3S2P59780 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC18.17■□□□□ 0.5
AP3S2P59780 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
AP3S2P59780 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC18.17■□□□□ 0.5
AP3S2P59780 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC18.17■□□□□ 0.5
AP3S2P59780 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
AP3S2P59780 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
AP3S2P59780 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
AP3S2P59780 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC18.17■□□□□ 0.5
AP3S2P59780 AP005212.1-201ENST00000581547 1997 ntBASIC18.17■□□□□ 0.5
AP3S2P59780 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.17■□□□□ 0.5
AP3S2P59780 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
AP3S2P59780 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC18.17■□□□□ 0.5
AP3S2P59780 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC18.16■□□□□ 0.5
AP3S2P59780 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC18.16■□□□□ 0.5
AP3S2P59780 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
AP3S2P59780 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
AP3S2P59780 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
AP3S2P59780 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
AP3S2P59780 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
AP3S2P59780 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
AP3S2P59780 ASB1-202ENST00000409297 878 ntTSL 5 BASIC18.16■□□□□ 0.5
AP3S2P59780 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
AP3S2P59780 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC18.16■□□□□ 0.5
AP3S2P59780 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
AP3S2P59780 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC18.16■□□□□ 0.5
AP3S2P59780 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
AP3S2P59780 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC18.16■□□□□ 0.5
AP3S2P59780 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
AP3S2P59780 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
AP3S2P59780 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
AP3S2P59780 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
AP3S2P59780 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC18.15■□□□□ 0.5
AP3S2P59780 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
AP3S2P59780 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
AP3S2P59780 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
AP3S2P59780 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC18.15■□□□□ 0.5
AP3S2P59780 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
AP3S2P59780 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
AP3S2P59780 ME2-216ENST00000639850 2331 ntTSL 5 BASIC18.15■□□□□ 0.5
AP3S2P59780 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
AP3S2P59780 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC18.15■□□□□ 0.5
AP3S2P59780 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
AP3S2P59780 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
AP3S2P59780 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC18.15■□□□□ 0.5
AP3S2P59780 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
AP3S2P59780 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
AP3S2P59780 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
AP3S2P59780 MTX2-204ENST00000443241 799 ntTSL 3 BASIC18.15■□□□□ 0.5
AP3S2P59780 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC18.15■□□□□ 0.5
AP3S2P59780 THA1P-201ENST00000590384 1145 ntBASIC18.15■□□□□ 0.5
AP3S2P59780 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC18.15■□□□□ 0.5
AP3S2P59780 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC18.15■□□□□ 0.5
AP3S2P59780 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC18.15■□□□□ 0.5
AP3S2P59780 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
AP3S2P59780 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
AP3S2P59780 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
AP3S2P59780 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC18.14■□□□□ 0.49
AP3S2P59780 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC18.14■□□□□ 0.49
AP3S2P59780 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC18.14■□□□□ 0.49
AP3S2P59780 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
AP3S2P59780 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
AP3S2P59780 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC18.14■□□□□ 0.49
AP3S2P59780 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
AP3S2P59780 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.14■□□□□ 0.49
AP3S2P59780 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
AP3S2P59780 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
AP3S2P59780 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC18.14■□□□□ 0.49
AP3S2P59780 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
AP3S2P59780 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
AP3S2P59780 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
AP3S2P59780 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms