Protein–RNA interactions for Protein: P57055

RIPPLY3, Protein ripply3, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3P57055 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RIPPLY3P57055 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC17.56■□□□□ 0.4
RIPPLY3P57055 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC17.56■□□□□ 0.4
RIPPLY3P57055 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC17.56■□□□□ 0.4
RIPPLY3P57055 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC17.56■□□□□ 0.4
RIPPLY3P57055 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RIPPLY3P57055 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
RIPPLY3P57055 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
RIPPLY3P57055 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RIPPLY3P57055 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RIPPLY3P57055 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RIPPLY3P57055 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RIPPLY3P57055 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RIPPLY3P57055 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC17.55■□□□□ 0.4
RIPPLY3P57055 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC17.55■□□□□ 0.4
RIPPLY3P57055 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RIPPLY3P57055 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
RIPPLY3P57055 AP000593.1-201ENST00000393668 712 ntBASIC17.55■□□□□ 0.4
RIPPLY3P57055 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC17.55■□□□□ 0.4
RIPPLY3P57055 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RIPPLY3P57055 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC17.55■□□□□ 0.4
RIPPLY3P57055 REXO2-216ENST00000544196 452 ntTSL 3 BASIC17.55■□□□□ 0.4
RIPPLY3P57055 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
RIPPLY3P57055 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC17.55■□□□□ 0.4
RIPPLY3P57055 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RIPPLY3P57055 AC005363.2-201ENST00000618631 242 ntBASIC17.55■□□□□ 0.4
RIPPLY3P57055 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC17.55■□□□□ 0.4
RIPPLY3P57055 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC17.55■□□□□ 0.4
RIPPLY3P57055 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
RIPPLY3P57055 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RIPPLY3P57055 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RIPPLY3P57055 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RIPPLY3P57055 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
RIPPLY3P57055 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
RIPPLY3P57055 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RIPPLY3P57055 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC17.54■□□□□ 0.4
RIPPLY3P57055 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RIPPLY3P57055 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
RIPPLY3P57055 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RIPPLY3P57055 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RIPPLY3P57055 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RIPPLY3P57055 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RIPPLY3P57055 TSPY15P-201ENST00000457163 923 ntBASIC17.54■□□□□ 0.4
RIPPLY3P57055 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
RIPPLY3P57055 METTL23-204ENST00000586752 904 ntTSL 2 BASIC17.54■□□□□ 0.4
RIPPLY3P57055 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
RIPPLY3P57055 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
RIPPLY3P57055 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RIPPLY3P57055 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RIPPLY3P57055 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
RIPPLY3P57055 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
RIPPLY3P57055 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RIPPLY3P57055 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RIPPLY3P57055 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC17.53■□□□□ 0.4
RIPPLY3P57055 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
RIPPLY3P57055 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RIPPLY3P57055 UPK3BP1-201ENST00000428678 509 ntBASIC17.53■□□□□ 0.4
RIPPLY3P57055 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RIPPLY3P57055 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC17.53■□□□□ 0.4
RIPPLY3P57055 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC17.53■□□□□ 0.4
RIPPLY3P57055 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RIPPLY3P57055 AL135905.2-201ENST00000584934 1404 ntBASIC17.53■□□□□ 0.4
RIPPLY3P57055 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RIPPLY3P57055 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RIPPLY3P57055 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RIPPLY3P57055 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
RIPPLY3P57055 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
RIPPLY3P57055 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
RIPPLY3P57055 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
RIPPLY3P57055 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RIPPLY3P57055 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
RIPPLY3P57055 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC17.52■□□□□ 0.4
RIPPLY3P57055 KRT18P56-201ENST00000507275 550 ntBASIC17.52■□□□□ 0.4
RIPPLY3P57055 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC17.52■□□□□ 0.4
RIPPLY3P57055 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC17.52■□□□□ 0.4
RIPPLY3P57055 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC17.52■□□□□ 0.4
RIPPLY3P57055 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC17.52■□□□□ 0.4
RIPPLY3P57055 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC17.52■□□□□ 0.4
RIPPLY3P57055 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
RIPPLY3P57055 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
RIPPLY3P57055 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
RIPPLY3P57055 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC17.52■□□□□ 0.39
RIPPLY3P57055 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
RIPPLY3P57055 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
RIPPLY3P57055 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
RIPPLY3P57055 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
RIPPLY3P57055 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC17.51■□□□□ 0.39
RIPPLY3P57055 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RIPPLY3P57055 USF2-207ENST00000595068 1612 ntTSL 5 BASIC17.51■□□□□ 0.39
RIPPLY3P57055 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC17.51■□□□□ 0.39
RIPPLY3P57055 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
RIPPLY3P57055 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC17.51■□□□□ 0.39
RIPPLY3P57055 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RIPPLY3P57055 AL355075.4-201ENST00000554988 638 ntBASIC17.51■□□□□ 0.39
RIPPLY3P57055 EEF1DP3-203ENST00000566025 782 ntBASIC17.51■□□□□ 0.39
RIPPLY3P57055 P4HB-223ENST00000576390 439 ntTSL 4 BASIC17.51■□□□□ 0.39
RIPPLY3P57055 NTF6B-201ENST00000591913 560 ntBASIC17.51■□□□□ 0.39
RIPPLY3P57055 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC17.51■□□□□ 0.39
RIPPLY3P57055 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RIPPLY3P57055 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms