Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 MIR6084-201ENST00000622012 110 ntBASIC20.53■□□□□ 0.88
SLC6A12P48065 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SLC6A12P48065 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
SLC6A12P48065 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC20.53■□□□□ 0.88
SLC6A12P48065 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SLC6A12P48065 DYM-203ENST00000442713 2147 ntTSL 2 BASIC20.53■□□□□ 0.88
SLC6A12P48065 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SLC6A12P48065 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC20.53■□□□□ 0.88
SLC6A12P48065 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
SLC6A12P48065 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SLC6A12P48065 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC20.52■□□□□ 0.88
SLC6A12P48065 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
SLC6A12P48065 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SLC6A12P48065 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
SLC6A12P48065 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
SLC6A12P48065 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC20.52■□□□□ 0.88
SLC6A12P48065 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SLC6A12P48065 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SLC6A12P48065 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC20.52■□□□□ 0.88
SLC6A12P48065 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
SLC6A12P48065 NME4-202ENST00000382940 766 ntTSL 3 BASIC20.52■□□□□ 0.88
SLC6A12P48065 MTURN-203ENST00000409688 843 ntTSL 2 BASIC20.52■□□□□ 0.88
SLC6A12P48065 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC20.52■□□□□ 0.88
SLC6A12P48065 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SLC6A12P48065 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC20.52■□□□□ 0.88
SLC6A12P48065 NME4-211ENST00000620944 1193 ntTSL 2 BASIC20.52■□□□□ 0.88
SLC6A12P48065 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SLC6A12P48065 EFS-203ENST00000429593 2610 ntTSL 2 BASIC20.52■□□□□ 0.87
SLC6A12P48065 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SLC6A12P48065 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC20.51■□□□□ 0.87
SLC6A12P48065 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
SLC6A12P48065 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SLC6A12P48065 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC20.51■□□□□ 0.87
SLC6A12P48065 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC20.51■□□□□ 0.87
SLC6A12P48065 CPT2-209ENST00000636935 803 ntTSL 5 BASIC20.51■□□□□ 0.87
SLC6A12P48065 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC20.51■□□□□ 0.87
SLC6A12P48065 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SLC6A12P48065 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC20.51■□□□□ 0.87
SLC6A12P48065 AC005229.4-201ENST00000610085 2198 ntBASIC20.51■□□□□ 0.87
SLC6A12P48065 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SLC6A12P48065 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SLC6A12P48065 NARF-205ENST00000412079 1760 ntTSL 5 BASIC20.5■□□□□ 0.87
SLC6A12P48065 AC027612.3-201ENST00000413684 1047 ntBASIC20.5■□□□□ 0.87
SLC6A12P48065 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC20.5■□□□□ 0.87
SLC6A12P48065 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
SLC6A12P48065 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SLC6A12P48065 AL024507.2-201ENST00000606070 2574 ntBASIC20.5■□□□□ 0.87
SLC6A12P48065 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC20.5■□□□□ 0.87
SLC6A12P48065 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC20.5■□□□□ 0.87
SLC6A12P48065 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SLC6A12P48065 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SLC6A12P48065 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC20.49■□□□□ 0.87
SLC6A12P48065 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
SLC6A12P48065 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
SLC6A12P48065 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC20.49■□□□□ 0.87
SLC6A12P48065 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SLC6A12P48065 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
SLC6A12P48065 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC20.49■□□□□ 0.87
SLC6A12P48065 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC20.49■□□□□ 0.87
SLC6A12P48065 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC20.49■□□□□ 0.87
SLC6A12P48065 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SLC6A12P48065 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC20.49■□□□□ 0.87
SLC6A12P48065 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SLC6A12P48065 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SLC6A12P48065 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SLC6A12P48065 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SLC6A12P48065 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC20.48■□□□□ 0.87
SLC6A12P48065 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SLC6A12P48065 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SLC6A12P48065 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC20.48■□□□□ 0.87
SLC6A12P48065 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SLC6A12P48065 AF106564.1-201ENST00000607058 2553 ntBASIC20.48■□□□□ 0.87
SLC6A12P48065 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SLC6A12P48065 PALM-208ENST00000592155 2272 ntTSL 4 BASIC20.48■□□□□ 0.87
SLC6A12P48065 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC20.48■□□□□ 0.87
SLC6A12P48065 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC20.48■□□□□ 0.87
SLC6A12P48065 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SLC6A12P48065 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SLC6A12P48065 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
SLC6A12P48065 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
SLC6A12P48065 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SLC6A12P48065 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC20.47■□□□□ 0.87
SLC6A12P48065 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SLC6A12P48065 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SLC6A12P48065 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SLC6A12P48065 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SLC6A12P48065 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SLC6A12P48065 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC20.47■□□□□ 0.87
SLC6A12P48065 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SLC6A12P48065 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SLC6A12P48065 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC20.47■□□□□ 0.87
SLC6A12P48065 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC20.46■□□□□ 0.87
SLC6A12P48065 STX5-203ENST00000394690 1568 ntTSL 5 BASIC20.46■□□□□ 0.87
SLC6A12P48065 PARN-205ENST00000539279 1557 ntTSL 2 BASIC20.46■□□□□ 0.87
SLC6A12P48065 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC20.46■□□□□ 0.87
SLC6A12P48065 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SLC6A12P48065 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
SLC6A12P48065 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SLC6A12P48065 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
SLC6A12P48065 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms