Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 UNC93B4-201ENST00000505679 747 ntBASIC26.41■■□□□ 1.82
PDE6BP35913 AC243732.1-201ENST00000612648 864 ntBASIC26.41■■□□□ 1.82
PDE6BP35913 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC26.41■■□□□ 1.82
PDE6BP35913 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
PDE6BP35913 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
PDE6BP35913 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC26.41■■□□□ 1.82
PDE6BP35913 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
PDE6BP35913 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
PDE6BP35913 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC26.4■■□□□ 1.82
PDE6BP35913 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC26.4■■□□□ 1.82
PDE6BP35913 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
PDE6BP35913 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
PDE6BP35913 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
PDE6BP35913 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
PDE6BP35913 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
PDE6BP35913 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
PDE6BP35913 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
PDE6BP35913 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC26.39■■□□□ 1.82
PDE6BP35913 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC26.39■■□□□ 1.82
PDE6BP35913 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC26.39■■□□□ 1.82
PDE6BP35913 AP003097.1-201ENST00000530657 1135 ntBASIC26.39■■□□□ 1.82
PDE6BP35913 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC26.39■■□□□ 1.82
PDE6BP35913 AC073648.6-201ENST00000641589 218 ntBASIC26.39■■□□□ 1.82
PDE6BP35913 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
PDE6BP35913 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC26.39■■□□□ 1.81
PDE6BP35913 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
PDE6BP35913 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
PDE6BP35913 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
PDE6BP35913 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC26.38■■□□□ 1.81
PDE6BP35913 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
PDE6BP35913 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
PDE6BP35913 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
PDE6BP35913 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
PDE6BP35913 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC26.38■■□□□ 1.81
PDE6BP35913 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
PDE6BP35913 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC26.38■■□□□ 1.81
PDE6BP35913 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC26.38■■□□□ 1.81
PDE6BP35913 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
PDE6BP35913 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
PDE6BP35913 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC26.37■■□□□ 1.81
PDE6BP35913 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
PDE6BP35913 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
PDE6BP35913 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC26.37■■□□□ 1.81
PDE6BP35913 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC26.37■■□□□ 1.81
PDE6BP35913 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC26.37■■□□□ 1.81
PDE6BP35913 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
PDE6BP35913 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC26.37■■□□□ 1.81
PDE6BP35913 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
PDE6BP35913 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
PDE6BP35913 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
PDE6BP35913 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC26.36■■□□□ 1.81
PDE6BP35913 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC26.36■■□□□ 1.81
PDE6BP35913 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC26.36■■□□□ 1.81
PDE6BP35913 LSM12P1-201ENST00000411836 588 ntBASIC26.36■■□□□ 1.81
PDE6BP35913 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC26.36■■□□□ 1.81
PDE6BP35913 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC26.36■■□□□ 1.81
PDE6BP35913 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC26.36■■□□□ 1.81
PDE6BP35913 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC26.36■■□□□ 1.81
PDE6BP35913 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
PDE6BP35913 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
PDE6BP35913 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC26.35■■□□□ 1.81
PDE6BP35913 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
PDE6BP35913 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
PDE6BP35913 USP36-216ENST00000589424 970 ntTSL 5 BASIC26.35■■□□□ 1.81
PDE6BP35913 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC26.35■■□□□ 1.81
PDE6BP35913 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC26.35■■□□□ 1.81
PDE6BP35913 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC26.35■■□□□ 1.81
PDE6BP35913 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC26.35■■□□□ 1.81
PDE6BP35913 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC26.34■■□□□ 1.81
PDE6BP35913 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
PDE6BP35913 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC26.34■■□□□ 1.81
PDE6BP35913 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
PDE6BP35913 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
PDE6BP35913 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
PDE6BP35913 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
PDE6BP35913 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
PDE6BP35913 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC26.34■■□□□ 1.81
PDE6BP35913 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
PDE6BP35913 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
PDE6BP35913 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC26.33■■□□□ 1.81
PDE6BP35913 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC26.33■■□□□ 1.81
PDE6BP35913 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC26.33■■□□□ 1.81
PDE6BP35913 AC008550.1-201ENST00000511500 884 ntBASIC26.33■■□□□ 1.81
PDE6BP35913 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC26.33■■□□□ 1.81
PDE6BP35913 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
PDE6BP35913 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC26.33■■□□□ 1.81
PDE6BP35913 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC26.33■■□□□ 1.81
PDE6BP35913 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC26.33■■□□□ 1.8
PDE6BP35913 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC26.32■■□□□ 1.8
PDE6BP35913 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
PDE6BP35913 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC26.32■■□□□ 1.8
PDE6BP35913 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC26.32■■□□□ 1.8
PDE6BP35913 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
PDE6BP35913 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
PDE6BP35913 UBE2SP1-201ENST00000450587 669 ntBASIC26.32■■□□□ 1.8
PDE6BP35913 GATS-209ENST00000454084 1030 ntTSL 3 BASIC26.32■■□□□ 1.8
PDE6BP35913 CD44-222ENST00000526025 1052 ntTSL 2 BASIC26.32■■□□□ 1.8
PDE6BP35913 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
PDE6BP35913 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC26.32■■□□□ 1.8
PDE6BP35913 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC26.32■■□□□ 1.8
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms