Protein–RNA interactions for Protein: P28329

CHAT, Choline O-acetyltransferase, humanhuman

Predictions only

Length 748 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHATP28329 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
CHATP28329 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CHATP28329 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC18.01■□□□□ 0.47
CHATP28329 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CHATP28329 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CHATP28329 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CHATP28329 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
CHATP28329 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CHATP28329 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CHATP28329 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
CHATP28329 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
CHATP28329 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC18■□□□□ 0.47
CHATP28329 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
CHATP28329 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
CHATP28329 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CHATP28329 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC18■□□□□ 0.47
CHATP28329 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
CHATP28329 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CHATP28329 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
CHATP28329 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC18■□□□□ 0.47
CHATP28329 MTURN-203ENST00000409688 843 ntTSL 2 BASIC18■□□□□ 0.47
CHATP28329 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC18■□□□□ 0.47
CHATP28329 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC18■□□□□ 0.47
CHATP28329 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC18■□□□□ 0.47
CHATP28329 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC18■□□□□ 0.47
CHATP28329 AL034346.1-201ENST00000568244 1277 ntBASIC18■□□□□ 0.47
CHATP28329 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC18■□□□□ 0.47
CHATP28329 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC18■□□□□ 0.47
CHATP28329 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
CHATP28329 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC18■□□□□ 0.47
CHATP28329 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
CHATP28329 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CHATP28329 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
CHATP28329 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC17.99■□□□□ 0.47
CHATP28329 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CHATP28329 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC17.99■□□□□ 0.47
CHATP28329 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CHATP28329 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
CHATP28329 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC17.99■□□□□ 0.47
CHATP28329 PTCHD3P2-201ENST00000424937 1205 ntBASIC17.99■□□□□ 0.47
CHATP28329 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC17.99■□□□□ 0.47
CHATP28329 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CHATP28329 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
CHATP28329 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC17.99■□□□□ 0.47
CHATP28329 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC17.99■□□□□ 0.47
CHATP28329 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
CHATP28329 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC17.99■□□□□ 0.47
CHATP28329 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC17.98■□□□□ 0.47
CHATP28329 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CHATP28329 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CHATP28329 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CHATP28329 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC17.98■□□□□ 0.47
CHATP28329 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
CHATP28329 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CHATP28329 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
CHATP28329 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC17.98■□□□□ 0.47
CHATP28329 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
CHATP28329 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CHATP28329 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC17.98■□□□□ 0.47
CHATP28329 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CHATP28329 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CHATP28329 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
CHATP28329 HES6-206ENST00000409574 738 ntTSL 2 BASIC17.98■□□□□ 0.47
CHATP28329 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC17.98■□□□□ 0.47
CHATP28329 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
CHATP28329 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
CHATP28329 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
CHATP28329 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
CHATP28329 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CHATP28329 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC17.98■□□□□ 0.47
CHATP28329 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CHATP28329 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
CHATP28329 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CHATP28329 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC17.98■□□□□ 0.47
CHATP28329 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CHATP28329 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CHATP28329 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CHATP28329 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC17.98■□□□□ 0.47
CHATP28329 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC17.98■□□□□ 0.47
CHATP28329 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CHATP28329 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC17.97■□□□□ 0.47
CHATP28329 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CHATP28329 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CHATP28329 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CHATP28329 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CHATP28329 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC17.97■□□□□ 0.47
CHATP28329 DYM-203ENST00000442713 2147 ntTSL 2 BASIC17.97■□□□□ 0.47
CHATP28329 AL138724.1-201ENST00000606771 1088 ntBASIC17.97■□□□□ 0.47
CHATP28329 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CHATP28329 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CHATP28329 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CHATP28329 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
CHATP28329 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CHATP28329 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CHATP28329 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
CHATP28329 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
CHATP28329 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CHATP28329 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC17.96■□□□□ 0.47
CHATP28329 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC17.96■□□□□ 0.47
CHATP28329 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms