Protein–RNA interactions for Protein: A6NDR6

MEIS3P1, Putative homeobox protein Meis3-like 1, humanhuman

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS3P1A6NDR6 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
MEIS3P1A6NDR6 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
MEIS3P1A6NDR6 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC18.12■□□□□ 0.49
MEIS3P1A6NDR6 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC18.12■□□□□ 0.49
MEIS3P1A6NDR6 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
MEIS3P1A6NDR6 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC18.12■□□□□ 0.49
MEIS3P1A6NDR6 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
MEIS3P1A6NDR6 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC18.12■□□□□ 0.49
MEIS3P1A6NDR6 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
MEIS3P1A6NDR6 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC18.12■□□□□ 0.49
MEIS3P1A6NDR6 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
MEIS3P1A6NDR6 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
MEIS3P1A6NDR6 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
MEIS3P1A6NDR6 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
MEIS3P1A6NDR6 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
MEIS3P1A6NDR6 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
MEIS3P1A6NDR6 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
MEIS3P1A6NDR6 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
MEIS3P1A6NDR6 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
MEIS3P1A6NDR6 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
MEIS3P1A6NDR6 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC18.12■□□□□ 0.49
MEIS3P1A6NDR6 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
MEIS3P1A6NDR6 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC18.12■□□□□ 0.49
MEIS3P1A6NDR6 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
MEIS3P1A6NDR6 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
MEIS3P1A6NDR6 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
MEIS3P1A6NDR6 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
MEIS3P1A6NDR6 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
MEIS3P1A6NDR6 YBX1P4-201ENST00000392794 808 ntBASIC18.11■□□□□ 0.49
MEIS3P1A6NDR6 AC079089.2-201ENST00000531211 1277 ntBASIC18.11■□□□□ 0.49
MEIS3P1A6NDR6 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
MEIS3P1A6NDR6 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
MEIS3P1A6NDR6 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
MEIS3P1A6NDR6 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
MEIS3P1A6NDR6 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC18.11■□□□□ 0.49
MEIS3P1A6NDR6 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC18.11■□□□□ 0.49
MEIS3P1A6NDR6 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
MEIS3P1A6NDR6 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
MEIS3P1A6NDR6 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
MEIS3P1A6NDR6 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
MEIS3P1A6NDR6 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC18.11■□□□□ 0.49
MEIS3P1A6NDR6 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
MEIS3P1A6NDR6 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
MEIS3P1A6NDR6 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC18.1■□□□□ 0.49
MEIS3P1A6NDR6 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC18.1■□□□□ 0.49
MEIS3P1A6NDR6 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
MEIS3P1A6NDR6 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
MEIS3P1A6NDR6 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
MEIS3P1A6NDR6 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
MEIS3P1A6NDR6 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
MEIS3P1A6NDR6 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
MEIS3P1A6NDR6 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
MEIS3P1A6NDR6 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
MEIS3P1A6NDR6 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC18.1■□□□□ 0.49
MEIS3P1A6NDR6 OR7E47P-201ENST00000546390 1422 ntBASIC18.1■□□□□ 0.49
MEIS3P1A6NDR6 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC18.1■□□□□ 0.49
MEIS3P1A6NDR6 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC18.1■□□□□ 0.49
MEIS3P1A6NDR6 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC18.1■□□□□ 0.49
MEIS3P1A6NDR6 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC18.1■□□□□ 0.49
MEIS3P1A6NDR6 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC18.1■□□□□ 0.49
MEIS3P1A6NDR6 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC18.1■□□□□ 0.49
MEIS3P1A6NDR6 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
MEIS3P1A6NDR6 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
MEIS3P1A6NDR6 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
MEIS3P1A6NDR6 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
MEIS3P1A6NDR6 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
MEIS3P1A6NDR6 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
MEIS3P1A6NDR6 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC18.09■□□□□ 0.49
MEIS3P1A6NDR6 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC18.09■□□□□ 0.49
MEIS3P1A6NDR6 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC18.09■□□□□ 0.49
MEIS3P1A6NDR6 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
MEIS3P1A6NDR6 AC007952.6-201ENST00000573168 2673 ntBASIC18.09■□□□□ 0.49
MEIS3P1A6NDR6 AC003957.1-201ENST00000625108 2673 ntBASIC18.09■□□□□ 0.49
MEIS3P1A6NDR6 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
MEIS3P1A6NDR6 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
MEIS3P1A6NDR6 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
MEIS3P1A6NDR6 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
MEIS3P1A6NDR6 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC18.09■□□□□ 0.49
MEIS3P1A6NDR6 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
MEIS3P1A6NDR6 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
MEIS3P1A6NDR6 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
MEIS3P1A6NDR6 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
MEIS3P1A6NDR6 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
MEIS3P1A6NDR6 VGF-203ENST00000611537 1622 ntTSL 5 BASIC18.09■□□□□ 0.49
MEIS3P1A6NDR6 EI24-211ENST00000534546 1544 ntTSL 2 BASIC18.08■□□□□ 0.49
MEIS3P1A6NDR6 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
MEIS3P1A6NDR6 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
MEIS3P1A6NDR6 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC18.08■□□□□ 0.49
MEIS3P1A6NDR6 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
MEIS3P1A6NDR6 AC021242.3-201ENST00000607598 1377 ntBASIC18.08■□□□□ 0.49
MEIS3P1A6NDR6 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
MEIS3P1A6NDR6 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.49
MEIS3P1A6NDR6 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
MEIS3P1A6NDR6 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC18.08■□□□□ 0.48
MEIS3P1A6NDR6 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
MEIS3P1A6NDR6 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
MEIS3P1A6NDR6 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
MEIS3P1A6NDR6 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
MEIS3P1A6NDR6 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC18.08■□□□□ 0.48
MEIS3P1A6NDR6 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms