Protein–RNA interactions for Protein: A0A0B4J245

TRAV12-1, T-cell receptor alpha variable 12-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-1A0A0B4J245 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TRAV12-1A0A0B4J245 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
TRAV12-1A0A0B4J245 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TRAV12-1A0A0B4J245 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAV12-1A0A0B4J245 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAV12-1A0A0B4J245 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC14.9□□□□□ -0.02
TRAV12-1A0A0B4J245 BX323043.1-201ENST00000641006 1765 ntBASIC14.9□□□□□ -0.02
TRAV12-1A0A0B4J245 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
TRAV12-1A0A0B4J245 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC14.9□□□□□ -0.02
TRAV12-1A0A0B4J245 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAV12-1A0A0B4J245 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
TRAV12-1A0A0B4J245 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAV12-1A0A0B4J245 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAV12-1A0A0B4J245 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TRAV12-1A0A0B4J245 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC14.9□□□□□ -0.02
TRAV12-1A0A0B4J245 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV12-1A0A0B4J245 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
TRAV12-1A0A0B4J245 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
TRAV12-1A0A0B4J245 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
TRAV12-1A0A0B4J245 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC14.89□□□□□ -0.03
TRAV12-1A0A0B4J245 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV12-1A0A0B4J245 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV12-1A0A0B4J245 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC14.89□□□□□ -0.03
TRAV12-1A0A0B4J245 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV12-1A0A0B4J245 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC14.89□□□□□ -0.03
TRAV12-1A0A0B4J245 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV12-1A0A0B4J245 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC14.89□□□□□ -0.03
TRAV12-1A0A0B4J245 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV12-1A0A0B4J245 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV12-1A0A0B4J245 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV12-1A0A0B4J245 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV12-1A0A0B4J245 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV12-1A0A0B4J245 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV12-1A0A0B4J245 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV12-1A0A0B4J245 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV12-1A0A0B4J245 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC14.89□□□□□ -0.03
TRAV12-1A0A0B4J245 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC14.89□□□□□ -0.03
TRAV12-1A0A0B4J245 AC006128.1-201ENST00000624704 1661 ntBASIC14.89□□□□□ -0.03
TRAV12-1A0A0B4J245 AF131216.4-201ENST00000638924 1588 ntBASIC14.89□□□□□ -0.03
TRAV12-1A0A0B4J245 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV12-1A0A0B4J245 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV12-1A0A0B4J245 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV12-1A0A0B4J245 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV12-1A0A0B4J245 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV12-1A0A0B4J245 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC14.88□□□□□ -0.03
TRAV12-1A0A0B4J245 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV12-1A0A0B4J245 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV12-1A0A0B4J245 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV12-1A0A0B4J245 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV12-1A0A0B4J245 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC14.88□□□□□ -0.03
TRAV12-1A0A0B4J245 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV12-1A0A0B4J245 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV12-1A0A0B4J245 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV12-1A0A0B4J245 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV12-1A0A0B4J245 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
TRAV12-1A0A0B4J245 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV12-1A0A0B4J245 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV12-1A0A0B4J245 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRAV12-1A0A0B4J245 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRAV12-1A0A0B4J245 REST-206ENST00000612429 1376 ntTSL 5 BASIC14.87□□□□□ -0.03
TRAV12-1A0A0B4J245 REST-207ENST00000616975 1370 ntTSL 5 BASIC14.87□□□□□ -0.03
TRAV12-1A0A0B4J245 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TRAV12-1A0A0B4J245 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC14.87□□□□□ -0.03
TRAV12-1A0A0B4J245 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
TRAV12-1A0A0B4J245 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRAV12-1A0A0B4J245 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TRAV12-1A0A0B4J245 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TRAV12-1A0A0B4J245 CEP120-209ENST00000515110 606 ntTSL 3 BASIC14.87□□□□□ -0.03
TRAV12-1A0A0B4J245 MIR6765-201ENST00000614092 87 ntBASIC14.87□□□□□ -0.03
TRAV12-1A0A0B4J245 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC14.87□□□□□ -0.03
TRAV12-1A0A0B4J245 AC026471.6-201ENST00000622954 1905 ntBASIC14.87□□□□□ -0.03
TRAV12-1A0A0B4J245 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRAV12-1A0A0B4J245 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRAV12-1A0A0B4J245 AC004687.1-201ENST00000579003 1625 ntBASIC14.87□□□□□ -0.03
TRAV12-1A0A0B4J245 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
TRAV12-1A0A0B4J245 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TRAV12-1A0A0B4J245 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRAV12-1A0A0B4J245 SMG8-203ENST00000578922 2178 ntBASIC14.87□□□□□ -0.03
TRAV12-1A0A0B4J245 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
TRAV12-1A0A0B4J245 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRAV12-1A0A0B4J245 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRAV12-1A0A0B4J245 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TRAV12-1A0A0B4J245 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRAV12-1A0A0B4J245 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC14.86□□□□□ -0.03
TRAV12-1A0A0B4J245 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRAV12-1A0A0B4J245 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRAV12-1A0A0B4J245 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRAV12-1A0A0B4J245 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC14.86□□□□□ -0.03
TRAV12-1A0A0B4J245 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC14.86□□□□□ -0.03
TRAV12-1A0A0B4J245 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRAV12-1A0A0B4J245 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRAV12-1A0A0B4J245 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRAV12-1A0A0B4J245 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRAV12-1A0A0B4J245 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRAV12-1A0A0B4J245 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TRAV12-1A0A0B4J245 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRAV12-1A0A0B4J245 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC14.86□□□□□ -0.03
TRAV12-1A0A0B4J245 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRAV12-1A0A0B4J245 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRAV12-1A0A0B4J245 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms