Protein–RNA interactions for Protein: O00571

DDX3X, ATP-dependent RNA helicase DDX3X, humanhuman

Known RBP eCLIP

Length 662 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX3XO00571 EEF1A1-209ENST00000495333 958 ntTSL 56.6□□□□□ -1.351e-323■□□□□ 9.5
DDX3XO00571 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.755e-88■□□□□ 9.5
DDX3XO00571 RPL29-206ENST00000481629 880 ntTSL 2 BASIC10.39□□□□□ -0.755e-88■□□□□ 9.5
DDX3XO00571 RPL29-205ENST00000480306 719 ntTSL 28.84□□□□□ -0.995e-88■□□□□ 9.5
DDX3XO00571 RPL29-207ENST00000486565 574 ntTSL 1 (best)7.38□□□□□ -1.235e-88■□□□□ 9.5
DDX3XO00571 CEP78-208ENST00000476652 634 ntTSL 321.3■■□□□ 14e-10■□□□□ 9.5
DDX3XO00571 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC21.28■■□□□ 14e-10■□□□□ 9.5
DDX3XO00571 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.914e-10■□□□□ 9.5
DDX3XO00571 CEP78-211ENST00000536374 2975 ntTSL 219.87■□□□□ 0.774e-10■□□□□ 9.5
DDX3XO00571 GCFC2-208ENST00000472230 2265 ntTSL 219.79■□□□□ 0.764e-10■□□□□ 9.5
DDX3XO00571 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.694e-10■□□□□ 9.5
DDX3XO00571 CEP78-205ENST00000424347 11198 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.394e-10■□□□□ 9.5
DDX3XO00571 POLR2B-204ENST00000433463 539 ntTSL 323.54■■□□□ 1.361e-9■□□□□ 9.5
DDX3XO00571 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC16.31■□□□□ 0.21e-9■□□□□ 9.5
DDX3XO00571 POLR2B-206ENST00000450656 608 ntTSL 413.28□□□□□ -0.281e-9■□□□□ 9.5
DDX3XO00571 POLR2B-210ENST00000495311 541 ntTSL 311.81□□□□□ -0.521e-9■□□□□ 9.5
DDX3XO00571 POLR2B-202ENST00000381227 4108 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.271e-9■□□□□ 9.5
DDX3XO00571 POLR2B-211ENST00000497845 551 ntTSL 45.36□□□□□ -1.551e-9■□□□□ 9.5
DDX3XO00571 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.88□□□□□ -1.631e-9■□□□□ 9.5
DDX3XO00571 RPS18-235ENST00000479802 413 ntTSL 211.81□□□□□ -0.521e-12■□□□□ 9.5
DDX3XO00571 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.561e-323■□□□□ 9.5
DDX3XO00571 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.79e-7■□□□□ 9.5
DDX3XO00571 RAB17-203ENST00000409576 466 ntTSL 3 BASIC17.89■□□□□ 0.459e-7■□□□□ 9.5
DDX3XO00571 RAB17-202ENST00000392001 1792 ntTSL 1 (best)16.59■□□□□ 0.259e-7■□□□□ 9.5
DDX3XO00571 RAB17-206ENST00000414278 1511 ntTSL 216.24■□□□□ 0.199e-7■□□□□ 9.5
DDX3XO00571 SLC25A39-215ENST00000592372 867 ntTSL 317.41■□□□□ 0.386e-9■□□□□ 9.5
DDX3XO00571 CES2-208ENST00000566359 500 ntTSL 216.68■□□□□ 0.268e-9■□□□□ 9.5
DDX3XO00571 RPS16-203ENST00000595386 1035 ntTSL 216.42■□□□□ 0.229e-22■□□□□ 9.5
DDX3XO00571 RPS16-208ENST00000602153 444 ntTSL 210.81□□□□□ -0.689e-22■□□□□ 9.5
DDX3XO00571 QRICH1-205ENST00000430979 583 ntTSL 427.73■■■□□ 2.032e-6■□□□□ 9.5
DDX3XO00571 QRICH1-206ENST00000437939 510 ntTSL 526.26■■□□□ 1.792e-6■□□□□ 9.5
DDX3XO00571 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC24.25■■□□□ 1.472e-6■□□□□ 9.5
DDX3XO00571 ZFYVE19-213ENST00000568062 580 ntTSL 324■■□□□ 1.432e-6■□□□□ 9.5
DDX3XO00571 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.42e-6■□□□□ 9.5
DDX3XO00571 SH3BP5-204ENST00000412806 1900 ntTSL 523.37■■□□□ 1.332e-6■□□□□ 9.5
DDX3XO00571 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.292e-6■□□□□ 9.5
DDX3XO00571 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC22.87■■□□□ 1.254e-12■□□□□ 9.5
DDX3XO00571 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC22.76■■□□□ 1.234e-9■□□□□ 9.5
DDX3XO00571 UNC119-203ENST00000444148 676 ntTSL 522.41■■□□□ 1.184e-9■□□□□ 9.5
DDX3XO00571 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC22.21■■□□□ 1.152e-6■□□□□ 9.5
DDX3XO00571 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC22.07■■□□□ 1.122e-6■□□□□ 9.5
DDX3XO00571 CCDC84-203ENST00000526463 1295 ntTSL 1 (best)21.29■■□□□ 12e-6■□□□□ 9.5
DDX3XO00571 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.944e-9■□□□□ 9.5
DDX3XO00571 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.824e-9■□□□□ 9.5
DDX3XO00571 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC19.63■□□□□ 0.734e-12■□□□□ 9.5
DDX3XO00571 TLE3-217ENST00000559574 325 ntTSL 519.59■□□□□ 0.734e-12■□□□□ 9.5
DDX3XO00571 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.76e-12■□□□□ 9.5
DDX3XO00571 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC19.3■□□□□ 0.684e-12■□□□□ 9.5
DDX3XO00571 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.644e-9■□□□□ 9.5
DDX3XO00571 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.634e-9■□□□□ 9.5
DDX3XO00571 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC18.96■□□□□ 0.632e-6■□□□□ 9.5
DDX3XO00571 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.614e-9■□□□□ 9.5
DDX3XO00571 ABHD14B-207ENST00000487005 1998 ntTSL 218.77■□□□□ 0.594e-9■□□□□ 9.5
DDX3XO00571 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.594e-12■□□□□ 9.5
DDX3XO00571 ZFYVE19-208ENST00000563530 382 ntTSL 418.63■□□□□ 0.572e-6■□□□□ 9.5
DDX3XO00571 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC18.51■□□□□ 0.554e-9■□□□□ 9.5
DDX3XO00571 ZFYVE19-210ENST00000566407 922 ntTSL 318.29■□□□□ 0.522e-6■□□□□ 9.5
DDX3XO00571 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC18.11■□□□□ 0.492e-6■□□□□ 9.5
DDX3XO00571 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.482e-6■□□□□ 9.5
DDX3XO00571 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.482e-6■□□□□ 9.5
DDX3XO00571 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.456e-12■□□□□ 9.5
DDX3XO00571 CCDC84-202ENST00000524670 885 ntTSL 517.85■□□□□ 0.452e-6■□□□□ 9.5
DDX3XO00571 CCDC84-206ENST00000532132 1119 ntTSL 1 (best)17.78■□□□□ 0.442e-6■□□□□ 9.5
DDX3XO00571 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.412e-6■□□□□ 9.5
DDX3XO00571 FANCI-208ENST00000564920 562 ntTSL 517.58■□□□□ 0.42e-6■□□□□ 9.5
DDX3XO00571 FANCI-209ENST00000565255 754 ntTSL 317.52■□□□□ 0.42e-6■□□□□ 9.5
DDX3XO00571 SNUPN-210ENST00000568162 759 ntTSL 317.46■□□□□ 0.392e-6■□□□□ 9.5
DDX3XO00571 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.352e-6■□□□□ 9.5
DDX3XO00571 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.312e-6■□□□□ 9.5
DDX3XO00571 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC17■□□□□ 0.314e-9■□□□□ 9.5
DDX3XO00571 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.272e-6■□□□□ 9.5
DDX3XO00571 SH3BP5-207ENST00000450625 763 ntTSL 316.6■□□□□ 0.252e-6■□□□□ 9.5
DDX3XO00571 UNC119-207ENST00000578434 556 ntTSL 416.38■□□□□ 0.214e-9■□□□□ 9.5
DDX3XO00571 HERC1-207ENST00000560316 577 ntTSL 416.17■□□□□ 0.184e-9■□□□□ 9.5
DDX3XO00571 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.182e-6■□□□□ 9.5
DDX3XO00571 AIP-203ENST00000528641 815 ntTSL 516.07■□□□□ 0.162e-6■□□□□ 9.5
DDX3XO00571 FANCI-213ENST00000567891 584 ntTSL 315.99■□□□□ 0.152e-6■□□□□ 9.5
DDX3XO00571 FANCI-216ENST00000570110 528 ntTSL 315.99■□□□□ 0.152e-6■□□□□ 9.5
DDX3XO00571 SNUPN-211ENST00000569817 1023 ntTSL 315.96■□□□□ 0.152e-6■□□□□ 9.5
DDX3XO00571 CCDC82-204ENST00000525786 550 ntTSL 415.93■□□□□ 0.142e-6■□□□□ 9.5
DDX3XO00571 BCKDHA-205ENST00000541315 632 ntTSL 315.91■□□□□ 0.142e-6■□□□□ 9.5
DDX3XO00571 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.132e-6■□□□□ 9.5
DDX3XO00571 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC15.77■□□□□ 0.124e-9■□□□□ 9.5
DDX3XO00571 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC15.74■□□□□ 0.114e-9■□□□□ 9.5
DDX3XO00571 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC15.59■□□□□ 0.094e-9■□□□□ 9.5
DDX3XO00571 SDCCAG8-207ENST00000490065 699 ntTSL 415.53■□□□□ 0.082e-6■□□□□ 9.5
DDX3XO00571 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.062e-6■□□□□ 9.5
DDX3XO00571 TRAPPC6B-206ENST00000556765 664 ntTSL 315.13■□□□□ 0.016e-12■□□□□ 9.5
DDX3XO00571 EHMT1-244ENST00000637655 100 ntTSL 515.12■□□□□ 0.012e-6■□□□□ 9.5
DDX3XO00571 TRIM4-201ENST00000349062 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 02e-6■□□□□ 9.5
DDX3XO00571 ZFYVE19-212ENST00000567756 571 ntTSL 314.96□□□□□ -0.012e-6■□□□□ 9.5
DDX3XO00571 TLE3-211ENST00000557997 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.034e-12■□□□□ 9.5
DDX3XO00571 ZFYVE19-202ENST00000336455 1784 ntTSL 2 BASIC14.83□□□□□ -0.032e-6■□□□□ 9.5
DDX3XO00571 ZFYVE19-215ENST00000570108 1669 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.042e-6■□□□□ 9.5
DDX3XO00571 RHOH-224ENST00000622175 2254 ntAPPRIS P1 TSL 4 BASIC14.78□□□□□ -0.044e-9■□□□□ 9.5
DDX3XO00571 TRIM4-203ENST00000355947 3383 ntAPPRIS P4 TSL 1 (best) BASIC14.73□□□□□ -0.052e-6■□□□□ 9.5
DDX3XO00571 RHOH-222ENST00000617441 1872 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.074e-9■□□□□ 9.5
DDX3XO00571 ZFYVE19-209ENST00000564258 2059 ntTSL 2 BASIC14.54□□□□□ -0.082e-6■□□□□ 9.5
DDX3XO00571 TLE3-225ENST00000561453 3719 ntTSL 514.47□□□□□ -0.094e-12■□□□□ 9.5
DDX3XO00571 SH3BP5-209ENST00000465894 532 ntTSL 514.3□□□□□ -0.122e-6■□□□□ 9.5
Retrieved 100 of 47,714 protein–RNA pairs in 1331.4 ms