RNA–Protein interactions for RNA: ENST00000497845.1

POLR2B-211, Transcript of RNA polymerase II subunit B, humanhuman

TSL 4

Gene POLR2B, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2B-211ENST00000497845 AEBP2Q6ZN18 517 aaPredicted RBP23.75■■□□□ 1.39
POLR2B-211ENST00000497845 CHIC1Q5VXU3 224 aa22.12■■□□□ 1.13
POLR2B-211ENST00000497845 SENP3Q9H4L4 574 aaPredicted RBP20.4■□□□□ 0.86
POLR2B-211ENST00000497845 PHF23Q9BUL5 403 aaPredicted RBP20■□□□□ 0.79
POLR2B-211ENST00000497845 POTEDQ86YR6 584 aa19.86■□□□□ 0.77
POLR2B-211ENST00000497845 FOXD1Q16676 465 aa19.18■□□□□ 0.66
POLR2B-211ENST00000497845 MSH5O43196 834 aa18.34■□□□□ 0.53
POLR2B-211ENST00000497845 PIAS4Q8N2W9 510 aaPredicted RBP17.64■□□□□ 0.41
POLR2B-211ENST00000497845 PPP6R1Q9UPN7 881 aa17.09■□□□□ 0.33
POLR2B-211ENST00000497845 ADRA2BP18089 450 aa16.97■□□□□ 0.31
POLR2B-211ENST00000497845 PLPPR3Q6T4P5 718 aa16.6■□□□□ 0.25
POLR2B-211ENST00000497845 CACNB1Q02641 598 aaPredicted RBP16.48■□□□□ 0.23
POLR2B-211ENST00000497845 DMRT2Q9Y5R5 561 aa16■□□□□ 0.15
POLR2B-211ENST00000497845 MAPK8IP2Q13387 824 aaPredicted RBP15.94■□□□□ 0.14
POLR2B-211ENST00000497845 RNF39Q9H2S5 420 aa15.57■□□□□ 0.08
POLR2B-211ENST00000497845 SCAF1Q9H7N4 1312 aaKnown RBP15.48■□□□□ 0.07
POLR2B-211ENST00000497845 NISCHQ9Y2I1 1504 aa15.46■□□□□ 0.07
POLR2B-211ENST00000497845 DCAF8L1A6NGE4 600 aa15.45■□□□□ 0.06
POLR2B-211ENST00000497845 POTEHQ6S545 545 aa15.34■□□□□ 0.05
POLR2B-211ENST00000497845 ABCC9O60706 1549 aa15.27■□□□□ 0.03
POLR2B-211ENST00000497845 C1QBPQ07021 282 aaKnown RBP15.26■□□□□ 0.03
POLR2B-211ENST00000497845 DNAJC5BQ9UF47 199 aa15.21■□□□□ 0.03
POLR2B-211ENST00000497845 HOXD11P31277 338 aaPredicted RBP14.96□□□□□ -0.01
POLR2B-211ENST00000497845 DNAJC5Q9H3Z4 198 aa14.63□□□□□ -0.07
POLR2B-211ENST00000497845 RNF216Q9NWF9 866 aaPredicted RBP14.55□□□□□ -0.08
POLR2B-211ENST00000497845 PPP4R3CPQ6ZMV5 832 aa14.42□□□□□ -0.1
POLR2B-211ENST00000497845 CNKSR2Q8WXI2 1034 aa14.39□□□□□ -0.11
POLR2B-211ENST00000497845 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.28□□□□□ -0.122e-6■■■■□ 20.5
POLR2B-211ENST00000497845 CCDC180Q9P1Z9 1646 aa14.21□□□□□ -0.13
POLR2B-211ENST00000497845 DSG3P32926 999 aa14.2□□□□□ -0.14
POLR2B-211ENST00000497845 PABPN1Q86U42 306 aaKnown RBP eCLIP14.11□□□□□ -0.15
POLR2B-211ENST00000497845 RB1CC1Q8TDY2 1594 aa14.04□□□□□ -0.16
POLR2B-211ENST00000497845 CAPN15O75808 1086 aa14.03□□□□□ -0.16
POLR2B-211ENST00000497845 SPINK5Q9NQ38 1064 aaPredicted RBP14.01□□□□□ -0.17
POLR2B-211ENST00000497845 U3KPZ7 1027 aaPredicted RBP13.85□□□□□ -0.19
POLR2B-211ENST00000497845 SP7Q8TDD2 431 aaPredicted RBP13.84□□□□□ -0.19
POLR2B-211ENST00000497845 CECR2Q9BXF3 1484 aa13.84□□□□□ -0.19
POLR2B-211ENST00000497845 CHRDL2Q6WN34 429 aa13.74□□□□□ -0.21
POLR2B-211ENST00000497845 NACADO15069 1562 aa13.7□□□□□ -0.22
POLR2B-211ENST00000497845 CC2D2AQ9P2K1 1620 aa13.68□□□□□ -0.22
POLR2B-211ENST00000497845 BICRAQ9NZM4 1560 aa13.68□□□□□ -0.22
POLR2B-211ENST00000497845 TRIM41Q8WV44 630 aa13.65□□□□□ -0.22
POLR2B-211ENST00000497845 UNC13AQ9UPW8 1703 aa13.64□□□□□ -0.23
POLR2B-211ENST00000497845 ABCB7O75027 752 aa13.62□□□□□ -0.23
POLR2B-211ENST00000497845 DCAF8L2P0C7V8 631 aa13.57□□□□□ -0.24
POLR2B-211ENST00000497845 TRHP20396 242 aaPredicted RBP13.55□□□□□ -0.24
POLR2B-211ENST00000497845 RBM42Q9BTD8 480 aaKnown RBP13.55□□□□□ -0.24
POLR2B-211ENST00000497845 CUX2O14529 1486 aa13.5□□□□□ -0.25
POLR2B-211ENST00000497845 NCBP3Q53F19 620 aaKnown RBP13.5□□□□□ -0.25
POLR2B-211ENST00000497845 EIF4G1Q04637 1599 aaKnown RBP13.43□□□□□ -0.26
POLR2B-211ENST00000497845 ZNF219Q9P2Y4 722 aaPredicted RBP13.43□□□□□ -0.26
POLR2B-211ENST00000497845 SHROOM4Q9ULL8 1493 aa13.36□□□□□ -0.27
POLR2B-211ENST00000497845 NPM3O75607 178 aaKnown RBP13.33□□□□□ -0.28
POLR2B-211ENST00000497845 APLP2Q06481 763 aa13.29□□□□□ -0.28
POLR2B-211ENST00000497845 HAX1O00165 279 aa13.26□□□□□ -0.29
POLR2B-211ENST00000497845 ERCC6Q03468 1493 aa13.24□□□□□ -0.29
POLR2B-211ENST00000497845 PIP4P2Q8N4L2 257 aa13.18□□□□□ -0.3
POLR2B-211ENST00000497845 MYO15BQ96JP2 1530 aa13.18□□□□□ -0.3
POLR2B-211ENST00000497845 PLSCR2Q9NRY7 297 aa13.14□□□□□ -0.31
POLR2B-211ENST00000497845 SLC4A2P04920 1241 aa13.03□□□□□ -0.32
POLR2B-211ENST00000497845 EVX2Q03828 476 aa13.03□□□□□ -0.32
POLR2B-211ENST00000497845 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.02□□□□□ -0.33
POLR2B-211ENST00000497845 HNRNPUL2Q1KMD3 747 aaKnown RBP13.02□□□□□ -0.33
POLR2B-211ENST00000497845 AKT1S1Q96B36 256 aa13.01□□□□□ -0.33
POLR2B-211ENST00000497845 SCRIBQ14160 1630 aa13.01□□□□□ -0.33
POLR2B-211ENST00000497845 LHX8Q68G74 356 aa12.98□□□□□ -0.33
POLR2B-211ENST00000497845 POLA2Q14181 598 aa12.92□□□□□ -0.34
POLR2B-211ENST00000497845 REM2Q8IYK8 340 aaPredicted RBP12.92□□□□□ -0.34
POLR2B-211ENST00000497845 SAMD1Q6SPF0 538 aaPredicted RBP12.91□□□□□ -0.34
POLR2B-211ENST00000497845 FXR2P51116 673 aaKnown RBP eCLIP12.89□□□□□ -0.35
POLR2B-211ENST00000497845 NESP48681 1621 aa12.84□□□□□ -0.35
POLR2B-211ENST00000497845 THOC2Q8NI27 1593 aaKnown RBP12.84□□□□□ -0.35
POLR2B-211ENST00000497845 PITPNM1O00562 1244 aa12.8□□□□□ -0.36
POLR2B-211ENST00000497845 OSCARQ8IYS5 282 aa12.77□□□□□ -0.37
POLR2B-211ENST00000497845 ILDR1Q86SU0 546 aaPredicted RBP12.72□□□□□ -0.37
POLR2B-211ENST00000497845 SMARCA2P51531 1590 aa12.72□□□□□ -0.37
POLR2B-211ENST00000497845 BAZ1AQ9NRL2 1556 aaPredicted RBP12.7□□□□□ -0.38
POLR2B-211ENST00000497845 NCAPD3P42695 1498 aa12.7□□□□□ -0.38
POLR2B-211ENST00000497845 DCAF1Q9Y4B6 1507 aa12.67□□□□□ -0.38
POLR2B-211ENST00000497845 RIMBP3CA6NJZ7 1639 aa12.66□□□□□ -0.38
POLR2B-211ENST00000497845 RIMBP3BA6NNM3 1639 aa12.66□□□□□ -0.38
POLR2B-211ENST00000497845 RIMBP3Q9UFD9 1639 aa12.66□□□□□ -0.38
POLR2B-211ENST00000497845 GABBR2O75899 941 aa12.65□□□□□ -0.38
POLR2B-211ENST00000497845 ZCCHC6Q5VYS8 1495 aaKnown RBP12.6□□□□□ -0.39
POLR2B-211ENST00000497845 CYB5RLQ6IPT4 315 aa12.57□□□□□ -0.4
POLR2B-211ENST00000497845 KIF21AQ7Z4S6 1674 aa12.56□□□□□ -0.4
POLR2B-211ENST00000497845 ARHGEF11O15085 1522 aa12.54□□□□□ -0.4
POLR2B-211ENST00000497845 PDS5BQ9NTI5 1447 aa12.54□□□□□ -0.4
POLR2B-211ENST00000497845 ATAD2BQ9ULI0 1458 aa12.53□□□□□ -0.4
POLR2B-211ENST00000497845 C19orf67A6NJJ6 358 aa12.53□□□□□ -0.4
POLR2B-211ENST00000497845 LAMC3Q9Y6N6 1575 aa12.52□□□□□ -0.4
POLR2B-211ENST00000497845 ZBTB12Q9Y330 459 aaPredicted RBP12.51□□□□□ -0.41
POLR2B-211ENST00000497845 HMGXB3Q12766 1538 aa12.48□□□□□ -0.41
POLR2B-211ENST00000497845 MRC2Q9UBG0 1479 aa12.48□□□□□ -0.41
POLR2B-211ENST00000497845 WDR62O43379 1518 aa12.46□□□□□ -0.42
POLR2B-211ENST00000497845 PRKAR2AP13861 404 aaKnown RBP12.45□□□□□ -0.42
POLR2B-211ENST00000497845 POTEIP0CG38 1075 aa12.38□□□□□ -0.43
POLR2B-211ENST00000497845 ARAP1Q96P48 1450 aa12.37□□□□□ -0.43
POLR2B-211ENST00000497845 BAZ1BQ9UIG0 1483 aaKnown RBP12.36□□□□□ -0.43
POLR2B-211ENST00000497845 MYCNP04198 464 aaPredicted RBP12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms