Protein–RNA interactions for Protein: Q9Y6K1

DNMT3A, DNA (cytosine-5)-methyltransferase 3A, humanhuman

Predicted RBP Predictions only

Length 912 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3AQ9Y6K1 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
DNMT3AQ9Y6K1 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC20.88■□□□□ 0.93
DNMT3AQ9Y6K1 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
DNMT3AQ9Y6K1 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
DNMT3AQ9Y6K1 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
DNMT3AQ9Y6K1 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
DNMT3AQ9Y6K1 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
DNMT3AQ9Y6K1 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
DNMT3AQ9Y6K1 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC20.87■□□□□ 0.93
DNMT3AQ9Y6K1 CLDN5-201ENST00000403084 2357 ntBASIC20.87■□□□□ 0.93
DNMT3AQ9Y6K1 LSR-203ENST00000360798 1963 ntTSL 2 BASIC20.87■□□□□ 0.93
DNMT3AQ9Y6K1 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
DNMT3AQ9Y6K1 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
DNMT3AQ9Y6K1 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
DNMT3AQ9Y6K1 GLI3-203ENST00000437480 451 ntTSL 2 BASIC20.87■□□□□ 0.93
DNMT3AQ9Y6K1 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
DNMT3AQ9Y6K1 AC138907.5-202ENST00000569484 235 ntBASIC20.87■□□□□ 0.93
DNMT3AQ9Y6K1 KRT18P61-201ENST00000585825 1298 ntBASIC20.87■□□□□ 0.93
DNMT3AQ9Y6K1 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
DNMT3AQ9Y6K1 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
DNMT3AQ9Y6K1 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
DNMT3AQ9Y6K1 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
DNMT3AQ9Y6K1 AC003102.1-202ENST00000563394 1796 ntBASIC20.87■□□□□ 0.93
DNMT3AQ9Y6K1 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
DNMT3AQ9Y6K1 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
DNMT3AQ9Y6K1 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
DNMT3AQ9Y6K1 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
DNMT3AQ9Y6K1 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
DNMT3AQ9Y6K1 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
DNMT3AQ9Y6K1 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC20.86■□□□□ 0.93
DNMT3AQ9Y6K1 AC022517.1-201ENST00000592429 346 ntBASIC20.86■□□□□ 0.93
DNMT3AQ9Y6K1 AC104187.1-201ENST00000607510 612 ntBASIC20.86■□□□□ 0.93
DNMT3AQ9Y6K1 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
DNMT3AQ9Y6K1 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
DNMT3AQ9Y6K1 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
DNMT3AQ9Y6K1 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC20.86■□□□□ 0.93
DNMT3AQ9Y6K1 RNF146-206ENST00000480444 843 ntTSL 2 BASIC20.85■□□□□ 0.93
DNMT3AQ9Y6K1 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC20.85■□□□□ 0.93
DNMT3AQ9Y6K1 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC20.85■□□□□ 0.93
DNMT3AQ9Y6K1 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC20.85■□□□□ 0.93
DNMT3AQ9Y6K1 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC20.85■□□□□ 0.93
DNMT3AQ9Y6K1 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
DNMT3AQ9Y6K1 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
DNMT3AQ9Y6K1 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC20.84■□□□□ 0.93
DNMT3AQ9Y6K1 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
DNMT3AQ9Y6K1 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
DNMT3AQ9Y6K1 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC20.84■□□□□ 0.93
DNMT3AQ9Y6K1 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
DNMT3AQ9Y6K1 SERP1-208ENST00000491660 830 ntTSL 2 BASIC20.84■□□□□ 0.93
DNMT3AQ9Y6K1 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
DNMT3AQ9Y6K1 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
DNMT3AQ9Y6K1 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
DNMT3AQ9Y6K1 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
DNMT3AQ9Y6K1 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
DNMT3AQ9Y6K1 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
DNMT3AQ9Y6K1 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
DNMT3AQ9Y6K1 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
DNMT3AQ9Y6K1 KRT18P20-201ENST00000548986 1279 ntBASIC20.83■□□□□ 0.93
DNMT3AQ9Y6K1 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
DNMT3AQ9Y6K1 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
DNMT3AQ9Y6K1 GOLGA2P6-201ENST00000340929 2049 ntBASIC20.83■□□□□ 0.92
DNMT3AQ9Y6K1 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.92
DNMT3AQ9Y6K1 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC20.83■□□□□ 0.92
DNMT3AQ9Y6K1 C11orf96-202ENST00000528572 1834 ntBASIC20.83■□□□□ 0.92
DNMT3AQ9Y6K1 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC20.82■□□□□ 0.92
DNMT3AQ9Y6K1 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC20.82■□□□□ 0.92
DNMT3AQ9Y6K1 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
DNMT3AQ9Y6K1 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
DNMT3AQ9Y6K1 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
DNMT3AQ9Y6K1 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
DNMT3AQ9Y6K1 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
DNMT3AQ9Y6K1 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC20.82■□□□□ 0.92
DNMT3AQ9Y6K1 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
DNMT3AQ9Y6K1 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC20.82■□□□□ 0.92
DNMT3AQ9Y6K1 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC20.82■□□□□ 0.92
DNMT3AQ9Y6K1 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
DNMT3AQ9Y6K1 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
DNMT3AQ9Y6K1 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
DNMT3AQ9Y6K1 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
DNMT3AQ9Y6K1 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
DNMT3AQ9Y6K1 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC20.82■□□□□ 0.92
DNMT3AQ9Y6K1 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
DNMT3AQ9Y6K1 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
DNMT3AQ9Y6K1 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC20.81■□□□□ 0.92
DNMT3AQ9Y6K1 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC20.81■□□□□ 0.92
DNMT3AQ9Y6K1 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
DNMT3AQ9Y6K1 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
DNMT3AQ9Y6K1 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
DNMT3AQ9Y6K1 AC010141.2-201ENST00000452426 721 ntBASIC20.81■□□□□ 0.92
DNMT3AQ9Y6K1 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC20.81■□□□□ 0.92
DNMT3AQ9Y6K1 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC20.81■□□□□ 0.92
DNMT3AQ9Y6K1 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
DNMT3AQ9Y6K1 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC20.81■□□□□ 0.92
DNMT3AQ9Y6K1 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC20.81■□□□□ 0.92
DNMT3AQ9Y6K1 AP001160.3-201ENST00000601484 763 ntBASIC20.81■□□□□ 0.92
DNMT3AQ9Y6K1 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.81■□□□□ 0.92
DNMT3AQ9Y6K1 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
DNMT3AQ9Y6K1 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
DNMT3AQ9Y6K1 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC20.81■□□□□ 0.92
DNMT3AQ9Y6K1 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC20.81■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms