Protein–RNA interactions for Protein: Q9Y4B5

MTCL1, Microtubule cross-linking factor 1, humanhuman

Known RBP Predictions only

Length 1,905 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTCL1Q9Y4B5 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
MTCL1Q9Y4B5 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
MTCL1Q9Y4B5 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
MTCL1Q9Y4B5 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
MTCL1Q9Y4B5 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC22.31■■□□□ 1.16
MTCL1Q9Y4B5 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC22.31■■□□□ 1.16
MTCL1Q9Y4B5 MIR4758-201ENST00000577688 71 ntBASIC22.31■■□□□ 1.16
MTCL1Q9Y4B5 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
MTCL1Q9Y4B5 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
MTCL1Q9Y4B5 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
MTCL1Q9Y4B5 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC22.31■■□□□ 1.16
MTCL1Q9Y4B5 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
MTCL1Q9Y4B5 CD44-222ENST00000526025 1052 ntTSL 2 BASIC22.31■■□□□ 1.16
MTCL1Q9Y4B5 ISCU-212ENST00000547005 795 ntTSL 3 BASIC22.31■■□□□ 1.16
MTCL1Q9Y4B5 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC22.31■■□□□ 1.16
MTCL1Q9Y4B5 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
MTCL1Q9Y4B5 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
MTCL1Q9Y4B5 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC22.3■■□□□ 1.16
MTCL1Q9Y4B5 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
MTCL1Q9Y4B5 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
MTCL1Q9Y4B5 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC22.3■■□□□ 1.16
MTCL1Q9Y4B5 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC22.3■■□□□ 1.16
MTCL1Q9Y4B5 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC22.29■■□□□ 1.16
MTCL1Q9Y4B5 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
MTCL1Q9Y4B5 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
MTCL1Q9Y4B5 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC22.29■■□□□ 1.16
MTCL1Q9Y4B5 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
MTCL1Q9Y4B5 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
MTCL1Q9Y4B5 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC22.29■■□□□ 1.16
MTCL1Q9Y4B5 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC22.29■■□□□ 1.16
MTCL1Q9Y4B5 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC22.29■■□□□ 1.16
MTCL1Q9Y4B5 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
MTCL1Q9Y4B5 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
MTCL1Q9Y4B5 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
MTCL1Q9Y4B5 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
MTCL1Q9Y4B5 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC22.28■■□□□ 1.16
MTCL1Q9Y4B5 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC22.28■■□□□ 1.16
MTCL1Q9Y4B5 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
MTCL1Q9Y4B5 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
MTCL1Q9Y4B5 FAM201B-201ENST00000458407 597 ntBASIC22.28■■□□□ 1.16
MTCL1Q9Y4B5 RNF146-206ENST00000480444 843 ntTSL 2 BASIC22.28■■□□□ 1.16
MTCL1Q9Y4B5 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC22.28■■□□□ 1.16
MTCL1Q9Y4B5 AC008687.6-201ENST00000596318 630 ntBASIC22.28■■□□□ 1.16
MTCL1Q9Y4B5 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC22.28■■□□□ 1.16
MTCL1Q9Y4B5 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC22.28■■□□□ 1.16
MTCL1Q9Y4B5 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC22.28■■□□□ 1.16
MTCL1Q9Y4B5 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC22.28■■□□□ 1.16
MTCL1Q9Y4B5 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC22.27■■□□□ 1.16
MTCL1Q9Y4B5 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
MTCL1Q9Y4B5 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
MTCL1Q9Y4B5 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC22.27■■□□□ 1.16
MTCL1Q9Y4B5 AC010980.2-201ENST00000587099 1412 ntBASIC22.27■■□□□ 1.16
MTCL1Q9Y4B5 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
MTCL1Q9Y4B5 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
MTCL1Q9Y4B5 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC22.27■■□□□ 1.16
MTCL1Q9Y4B5 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC22.27■■□□□ 1.16
MTCL1Q9Y4B5 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
MTCL1Q9Y4B5 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC22.27■■□□□ 1.16
MTCL1Q9Y4B5 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
MTCL1Q9Y4B5 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC22.27■■□□□ 1.16
MTCL1Q9Y4B5 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC22.27■■□□□ 1.16
MTCL1Q9Y4B5 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
MTCL1Q9Y4B5 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.15
MTCL1Q9Y4B5 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC22.26■■□□□ 1.15
MTCL1Q9Y4B5 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC22.26■■□□□ 1.15
MTCL1Q9Y4B5 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
MTCL1Q9Y4B5 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
MTCL1Q9Y4B5 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
MTCL1Q9Y4B5 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC22.26■■□□□ 1.15
MTCL1Q9Y4B5 RARG-204ENST00000543726 1779 ntTSL 2 BASIC22.26■■□□□ 1.15
MTCL1Q9Y4B5 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
MTCL1Q9Y4B5 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
MTCL1Q9Y4B5 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC22.26■■□□□ 1.15
MTCL1Q9Y4B5 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
MTCL1Q9Y4B5 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
MTCL1Q9Y4B5 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
MTCL1Q9Y4B5 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
MTCL1Q9Y4B5 MIPEPP3-201ENST00000412105 444 ntBASIC22.25■■□□□ 1.15
MTCL1Q9Y4B5 AC091874.3-201ENST00000512672 1195 ntBASIC22.25■■□□□ 1.15
MTCL1Q9Y4B5 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
MTCL1Q9Y4B5 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
MTCL1Q9Y4B5 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
MTCL1Q9Y4B5 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
MTCL1Q9Y4B5 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC22.25■■□□□ 1.15
MTCL1Q9Y4B5 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC22.25■■□□□ 1.15
MTCL1Q9Y4B5 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC22.25■■□□□ 1.15
MTCL1Q9Y4B5 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC22.25■■□□□ 1.15
MTCL1Q9Y4B5 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC22.25■■□□□ 1.15
MTCL1Q9Y4B5 AC243732.1-201ENST00000612648 864 ntBASIC22.25■■□□□ 1.15
MTCL1Q9Y4B5 INO80E-214ENST00000620599 515 ntTSL 2 BASIC22.25■■□□□ 1.15
MTCL1Q9Y4B5 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
MTCL1Q9Y4B5 NFE2L3P1-201ENST00000588207 1959 ntBASIC22.25■■□□□ 1.15
MTCL1Q9Y4B5 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
MTCL1Q9Y4B5 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
MTCL1Q9Y4B5 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
MTCL1Q9Y4B5 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
MTCL1Q9Y4B5 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
MTCL1Q9Y4B5 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC22.24■■□□□ 1.15
MTCL1Q9Y4B5 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
MTCL1Q9Y4B5 AC093787.1-201ENST00000450396 207 ntBASIC22.24■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms