Protein–RNA interactions for Protein: Q9Y252

RNF6, E3 ubiquitin-protein ligase RNF6, humanhuman

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF6Q9Y252 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RNF6Q9Y252 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RNF6Q9Y252 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RNF6Q9Y252 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RNF6Q9Y252 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RNF6Q9Y252 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC19.92■□□□□ 0.78
RNF6Q9Y252 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
RNF6Q9Y252 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC19.92■□□□□ 0.78
RNF6Q9Y252 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC19.92■□□□□ 0.78
RNF6Q9Y252 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC19.92■□□□□ 0.78
RNF6Q9Y252 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
RNF6Q9Y252 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC19.92■□□□□ 0.78
RNF6Q9Y252 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
RNF6Q9Y252 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
RNF6Q9Y252 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RNF6Q9Y252 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RNF6Q9Y252 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
RNF6Q9Y252 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RNF6Q9Y252 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
RNF6Q9Y252 LINC01960-201ENST00000563759 1884 ntBASIC19.91■□□□□ 0.78
RNF6Q9Y252 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RNF6Q9Y252 NME4-202ENST00000382940 766 ntTSL 3 BASIC19.91■□□□□ 0.78
RNF6Q9Y252 ASB1-202ENST00000409297 878 ntTSL 5 BASIC19.91■□□□□ 0.78
RNF6Q9Y252 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC19.91■□□□□ 0.78
RNF6Q9Y252 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC19.91■□□□□ 0.78
RNF6Q9Y252 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC19.91■□□□□ 0.78
RNF6Q9Y252 NME4-211ENST00000620944 1193 ntTSL 2 BASIC19.91■□□□□ 0.78
RNF6Q9Y252 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
RNF6Q9Y252 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC19.91■□□□□ 0.78
RNF6Q9Y252 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC19.91■□□□□ 0.78
RNF6Q9Y252 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RNF6Q9Y252 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RNF6Q9Y252 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RNF6Q9Y252 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RNF6Q9Y252 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
RNF6Q9Y252 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC19.9■□□□□ 0.78
RNF6Q9Y252 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RNF6Q9Y252 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RNF6Q9Y252 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC19.9■□□□□ 0.78
RNF6Q9Y252 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC19.9■□□□□ 0.78
RNF6Q9Y252 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RNF6Q9Y252 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
RNF6Q9Y252 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC19.9■□□□□ 0.78
RNF6Q9Y252 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC19.9■□□□□ 0.78
RNF6Q9Y252 YBX1P1-201ENST00000445822 960 ntBASIC19.9■□□□□ 0.78
RNF6Q9Y252 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC19.9■□□□□ 0.78
RNF6Q9Y252 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
RNF6Q9Y252 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RNF6Q9Y252 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RNF6Q9Y252 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RNF6Q9Y252 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RNF6Q9Y252 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
RNF6Q9Y252 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
RNF6Q9Y252 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
RNF6Q9Y252 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
RNF6Q9Y252 HACD1-201ENST00000326961 773 ntTSL 2 BASIC19.89■□□□□ 0.77
RNF6Q9Y252 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RNF6Q9Y252 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
RNF6Q9Y252 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RNF6Q9Y252 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC19.89■□□□□ 0.77
RNF6Q9Y252 AICDA-202ENST00000537228 667 ntTSL 5 BASIC19.89■□□□□ 0.77
RNF6Q9Y252 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RNF6Q9Y252 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
RNF6Q9Y252 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RNF6Q9Y252 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RNF6Q9Y252 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
RNF6Q9Y252 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RNF6Q9Y252 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
RNF6Q9Y252 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC19.88■□□□□ 0.77
RNF6Q9Y252 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
RNF6Q9Y252 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RNF6Q9Y252 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
RNF6Q9Y252 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
RNF6Q9Y252 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC19.88■□□□□ 0.77
RNF6Q9Y252 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
RNF6Q9Y252 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC19.88■□□□□ 0.77
RNF6Q9Y252 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC19.88■□□□□ 0.77
RNF6Q9Y252 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC19.88■□□□□ 0.77
RNF6Q9Y252 AL031602.1-201ENST00000633169 911 ntBASIC19.88■□□□□ 0.77
RNF6Q9Y252 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
RNF6Q9Y252 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RNF6Q9Y252 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC19.88■□□□□ 0.77
RNF6Q9Y252 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RNF6Q9Y252 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RNF6Q9Y252 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
RNF6Q9Y252 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
RNF6Q9Y252 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC19.87■□□□□ 0.77
RNF6Q9Y252 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC19.87■□□□□ 0.77
RNF6Q9Y252 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.87■□□□□ 0.77
RNF6Q9Y252 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RNF6Q9Y252 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC19.87■□□□□ 0.77
RNF6Q9Y252 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
RNF6Q9Y252 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RNF6Q9Y252 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC19.87■□□□□ 0.77
RNF6Q9Y252 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RNF6Q9Y252 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
RNF6Q9Y252 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RNF6Q9Y252 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
RNF6Q9Y252 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RNF6Q9Y252 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 12.8 ms