Protein–RNA interactions for Protein: Q9H7N4

SCAF1, Splicing factor, arginine/serine-rich 19, humanhuman

Known RBP Predictions only

Length 1,312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1Q9H7N4 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC31.47■■■□□ 2.63
SCAF1Q9H7N4 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC31.47■■■□□ 2.63
SCAF1Q9H7N4 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC31.47■■■□□ 2.63
SCAF1Q9H7N4 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC31.47■■■□□ 2.63
SCAF1Q9H7N4 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC31.47■■■□□ 2.63
SCAF1Q9H7N4 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC31.47■■■□□ 2.63
SCAF1Q9H7N4 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC31.47■■■□□ 2.63
SCAF1Q9H7N4 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC31.47■■■□□ 2.63
SCAF1Q9H7N4 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC31.46■■■□□ 2.63
SCAF1Q9H7N4 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
SCAF1Q9H7N4 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC31.46■■■□□ 2.63
SCAF1Q9H7N4 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC31.46■■■□□ 2.63
SCAF1Q9H7N4 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC31.46■■■□□ 2.63
SCAF1Q9H7N4 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
SCAF1Q9H7N4 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC31.46■■■□□ 2.63
SCAF1Q9H7N4 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC31.46■■■□□ 2.63
SCAF1Q9H7N4 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC31.46■■■□□ 2.63
SCAF1Q9H7N4 AC010525.1-201ENST00000585559 441 ntBASIC31.46■■■□□ 2.63
SCAF1Q9H7N4 TFG-210ENST00000620299 1289 ntTSL 5 BASIC31.46■■■□□ 2.63
SCAF1Q9H7N4 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC31.46■■■□□ 2.63
SCAF1Q9H7N4 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC31.46■■■□□ 2.63
SCAF1Q9H7N4 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
SCAF1Q9H7N4 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
SCAF1Q9H7N4 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC31.45■■■□□ 2.63
SCAF1Q9H7N4 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
SCAF1Q9H7N4 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
SCAF1Q9H7N4 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
SCAF1Q9H7N4 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC31.45■■■□□ 2.62
SCAF1Q9H7N4 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC31.45■■■□□ 2.62
SCAF1Q9H7N4 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC31.45■■■□□ 2.62
SCAF1Q9H7N4 AP006294.2-201ENST00000641667 209 ntBASIC31.45■■■□□ 2.62
SCAF1Q9H7N4 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC31.45■■■□□ 2.62
SCAF1Q9H7N4 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
SCAF1Q9H7N4 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC31.44■■■□□ 2.62
SCAF1Q9H7N4 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
SCAF1Q9H7N4 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
SCAF1Q9H7N4 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
SCAF1Q9H7N4 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
SCAF1Q9H7N4 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC31.44■■■□□ 2.62
SCAF1Q9H7N4 KRT18P11-201ENST00000435214 1283 ntBASIC31.44■■■□□ 2.62
SCAF1Q9H7N4 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC31.44■■■□□ 2.62
SCAF1Q9H7N4 MAZ-216ENST00000616501 991 ntTSL 5 BASIC31.44■■■□□ 2.62
SCAF1Q9H7N4 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
SCAF1Q9H7N4 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
SCAF1Q9H7N4 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
SCAF1Q9H7N4 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC31.43■■■□□ 2.62
SCAF1Q9H7N4 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC31.43■■■□□ 2.62
SCAF1Q9H7N4 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC31.43■■■□□ 2.62
SCAF1Q9H7N4 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
SCAF1Q9H7N4 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
SCAF1Q9H7N4 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC31.43■■■□□ 2.62
SCAF1Q9H7N4 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
SCAF1Q9H7N4 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
SCAF1Q9H7N4 ATP5C1-201ENST00000335698 1078 ntAPPRIS P3 TSL 1 (best) BASIC31.43■■■□□ 2.62
SCAF1Q9H7N4 RHEB-204ENST00000472642 900 ntTSL 3 BASIC31.43■■■□□ 2.62
SCAF1Q9H7N4 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC31.43■■■□□ 2.62
SCAF1Q9H7N4 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
SCAF1Q9H7N4 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
SCAF1Q9H7N4 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
SCAF1Q9H7N4 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
SCAF1Q9H7N4 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
SCAF1Q9H7N4 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC31.42■■■□□ 2.62
SCAF1Q9H7N4 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
SCAF1Q9H7N4 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
SCAF1Q9H7N4 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
SCAF1Q9H7N4 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
SCAF1Q9H7N4 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC31.42■■■□□ 2.62
SCAF1Q9H7N4 SLC7A5P2-201ENST00000553010 536 ntBASIC31.42■■■□□ 2.62
SCAF1Q9H7N4 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
SCAF1Q9H7N4 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC31.42■■■□□ 2.62
SCAF1Q9H7N4 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC31.42■■■□□ 2.62
SCAF1Q9H7N4 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC31.42■■■□□ 2.62
SCAF1Q9H7N4 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
SCAF1Q9H7N4 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
SCAF1Q9H7N4 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
SCAF1Q9H7N4 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC31.41■■■□□ 2.62
SCAF1Q9H7N4 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC31.41■■■□□ 2.62
SCAF1Q9H7N4 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
SCAF1Q9H7N4 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
SCAF1Q9H7N4 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
SCAF1Q9H7N4 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC31.41■■■□□ 2.62
SCAF1Q9H7N4 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
SCAF1Q9H7N4 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC31.41■■■□□ 2.62
SCAF1Q9H7N4 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC31.41■■■□□ 2.62
SCAF1Q9H7N4 AL596275.1-201ENST00000423464 877 ntBASIC31.41■■■□□ 2.62
SCAF1Q9H7N4 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
SCAF1Q9H7N4 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC31.41■■■□□ 2.62
SCAF1Q9H7N4 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC31.41■■■□□ 2.62
SCAF1Q9H7N4 AF106564.1-201ENST00000607058 2553 ntBASIC31.41■■■□□ 2.62
SCAF1Q9H7N4 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC31.4■■■□□ 2.62
SCAF1Q9H7N4 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC31.4■■■□□ 2.62
SCAF1Q9H7N4 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC31.4■■■□□ 2.62
SCAF1Q9H7N4 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
SCAF1Q9H7N4 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC31.4■■■□□ 2.62
SCAF1Q9H7N4 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC31.4■■■□□ 2.62
SCAF1Q9H7N4 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC31.39■■■□□ 2.62
SCAF1Q9H7N4 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC31.39■■■□□ 2.62
SCAF1Q9H7N4 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC31.39■■■□□ 2.62
SCAF1Q9H7N4 METTL15-202ENST00000403099 795 ntTSL 5 BASIC31.39■■■□□ 2.62
SCAF1Q9H7N4 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC31.39■■■□□ 2.62
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms