Protein–RNA interactions for Protein: Q9H3M0

KCNF1, Potassium voltage-gated channel subfamily F member 1, humanhuman

Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNF1Q9H3M0 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC23.25■■□□□ 1.31
KCNF1Q9H3M0 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC23.25■■□□□ 1.31
KCNF1Q9H3M0 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC23.25■■□□□ 1.31
KCNF1Q9H3M0 AC079089.2-201ENST00000531211 1277 ntBASIC23.25■■□□□ 1.31
KCNF1Q9H3M0 DUX4L18-201ENST00000553347 1267 ntBASIC23.25■■□□□ 1.31
KCNF1Q9H3M0 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
KCNF1Q9H3M0 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
KCNF1Q9H3M0 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC23.25■■□□□ 1.31
KCNF1Q9H3M0 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC23.25■■□□□ 1.31
KCNF1Q9H3M0 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
KCNF1Q9H3M0 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
KCNF1Q9H3M0 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
KCNF1Q9H3M0 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC23.24■■□□□ 1.31
KCNF1Q9H3M0 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC23.24■■□□□ 1.31
KCNF1Q9H3M0 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC23.24■■□□□ 1.31
KCNF1Q9H3M0 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
KCNF1Q9H3M0 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
KCNF1Q9H3M0 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC23.24■■□□□ 1.31
KCNF1Q9H3M0 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
KCNF1Q9H3M0 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
KCNF1Q9H3M0 AC005703.6-201ENST00000623265 1329 ntBASIC23.24■■□□□ 1.31
KCNF1Q9H3M0 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC23.24■■□□□ 1.31
KCNF1Q9H3M0 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
KCNF1Q9H3M0 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
KCNF1Q9H3M0 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
KCNF1Q9H3M0 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC23.24■■□□□ 1.31
KCNF1Q9H3M0 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
KCNF1Q9H3M0 PLK5-205ENST00000642079 1969 ntBASIC23.23■■□□□ 1.31
KCNF1Q9H3M0 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
KCNF1Q9H3M0 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
KCNF1Q9H3M0 BID-204ENST00000399767 2129 ntTSL 2 BASIC23.23■■□□□ 1.31
KCNF1Q9H3M0 AC006128.1-201ENST00000624704 1661 ntBASIC23.23■■□□□ 1.31
KCNF1Q9H3M0 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
KCNF1Q9H3M0 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
KCNF1Q9H3M0 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC23.23■■□□□ 1.31
KCNF1Q9H3M0 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC23.23■■□□□ 1.31
KCNF1Q9H3M0 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC23.23■■□□□ 1.31
KCNF1Q9H3M0 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
KCNF1Q9H3M0 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC23.23■■□□□ 1.31
KCNF1Q9H3M0 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC23.23■■□□□ 1.31
KCNF1Q9H3M0 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
KCNF1Q9H3M0 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
KCNF1Q9H3M0 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC23.23■■□□□ 1.31
KCNF1Q9H3M0 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC23.23■■□□□ 1.31
KCNF1Q9H3M0 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC23.23■■□□□ 1.31
KCNF1Q9H3M0 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
KCNF1Q9H3M0 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC23.22■■□□□ 1.31
KCNF1Q9H3M0 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
KCNF1Q9H3M0 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
KCNF1Q9H3M0 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
KCNF1Q9H3M0 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
KCNF1Q9H3M0 TK2-202ENST00000417693 1046 ntTSL 2 BASIC23.22■■□□□ 1.31
KCNF1Q9H3M0 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
KCNF1Q9H3M0 PALM-207ENST00000590161 2137 ntTSL 4 BASIC23.22■■□□□ 1.31
KCNF1Q9H3M0 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
KCNF1Q9H3M0 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC23.22■■□□□ 1.31
KCNF1Q9H3M0 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
KCNF1Q9H3M0 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC23.22■■□□□ 1.31
KCNF1Q9H3M0 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
KCNF1Q9H3M0 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC23.22■■□□□ 1.31
KCNF1Q9H3M0 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
KCNF1Q9H3M0 AC027702.1-201ENST00000563810 1770 ntBASIC23.22■■□□□ 1.31
KCNF1Q9H3M0 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
KCNF1Q9H3M0 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
KCNF1Q9H3M0 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC23.21■■□□□ 1.31
KCNF1Q9H3M0 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC23.21■■□□□ 1.31
KCNF1Q9H3M0 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
KCNF1Q9H3M0 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC23.21■■□□□ 1.31
KCNF1Q9H3M0 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC23.21■■□□□ 1.31
KCNF1Q9H3M0 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
KCNF1Q9H3M0 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
KCNF1Q9H3M0 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
KCNF1Q9H3M0 AC112907.3-201ENST00000577781 2400 ntBASIC23.21■■□□□ 1.31
KCNF1Q9H3M0 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC23.2■■□□□ 1.3
KCNF1Q9H3M0 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC23.2■■□□□ 1.3
KCNF1Q9H3M0 USP45-205ENST00000472914 1617 ntTSL 5 BASIC23.2■■□□□ 1.3
KCNF1Q9H3M0 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
KCNF1Q9H3M0 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
KCNF1Q9H3M0 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC23.2■■□□□ 1.3
KCNF1Q9H3M0 ABHD17AP3-201ENST00000503096 1137 ntBASIC23.2■■□□□ 1.3
KCNF1Q9H3M0 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC23.2■■□□□ 1.3
KCNF1Q9H3M0 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC23.2■■□□□ 1.3
KCNF1Q9H3M0 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
KCNF1Q9H3M0 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC23.2■■□□□ 1.3
KCNF1Q9H3M0 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
KCNF1Q9H3M0 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
KCNF1Q9H3M0 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
KCNF1Q9H3M0 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC23.19■■□□□ 1.3
KCNF1Q9H3M0 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC23.19■■□□□ 1.3
KCNF1Q9H3M0 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC23.19■■□□□ 1.3
KCNF1Q9H3M0 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
KCNF1Q9H3M0 EI24-211ENST00000534546 1544 ntTSL 2 BASIC23.19■■□□□ 1.3
KCNF1Q9H3M0 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
KCNF1Q9H3M0 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC23.19■■□□□ 1.3
KCNF1Q9H3M0 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC23.19■■□□□ 1.3
KCNF1Q9H3M0 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC23.19■■□□□ 1.3
KCNF1Q9H3M0 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
KCNF1Q9H3M0 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
KCNF1Q9H3M0 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
KCNF1Q9H3M0 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC23.19■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms