Protein–RNA interactions for Protein: Q9BYR8

KRTAP3-1, Keratin-associated protein 3-1, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-1Q9BYR8 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
KRTAP3-1Q9BYR8 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
KRTAP3-1Q9BYR8 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
KRTAP3-1Q9BYR8 KRT125P-201ENST00000546827 989 ntBASIC10.78□□□□□ -0.68
KRTAP3-1Q9BYR8 AC241377.3-202ENST00000626088 1088 ntBASIC10.78□□□□□ -0.68
KRTAP3-1Q9BYR8 AC241585.3-202ENST00000628937 1088 ntBASIC10.78□□□□□ -0.68
KRTAP3-1Q9BYR8 AC245100.8-202ENST00000629247 1058 ntBASIC10.78□□□□□ -0.68
KRTAP3-1Q9BYR8 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC10.78□□□□□ -0.68
KRTAP3-1Q9BYR8 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
KRTAP3-1Q9BYR8 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
KRTAP3-1Q9BYR8 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
KRTAP3-1Q9BYR8 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
KRTAP3-1Q9BYR8 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
KRTAP3-1Q9BYR8 PALM-207ENST00000590161 2137 ntTSL 4 BASIC10.78□□□□□ -0.68
KRTAP3-1Q9BYR8 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
KRTAP3-1Q9BYR8 ME2-216ENST00000639850 2331 ntTSL 5 BASIC10.78□□□□□ -0.68
KRTAP3-1Q9BYR8 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
KRTAP3-1Q9BYR8 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
KRTAP3-1Q9BYR8 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
KRTAP3-1Q9BYR8 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC10.77□□□□□ -0.68
KRTAP3-1Q9BYR8 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.68
KRTAP3-1Q9BYR8 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC10.77□□□□□ -0.68
KRTAP3-1Q9BYR8 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
KRTAP3-1Q9BYR8 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
KRTAP3-1Q9BYR8 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
KRTAP3-1Q9BYR8 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
KRTAP3-1Q9BYR8 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC10.77□□□□□ -0.68
KRTAP3-1Q9BYR8 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC10.77□□□□□ -0.69
KRTAP3-1Q9BYR8 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
KRTAP3-1Q9BYR8 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC10.77□□□□□ -0.69
KRTAP3-1Q9BYR8 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
KRTAP3-1Q9BYR8 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
KRTAP3-1Q9BYR8 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC10.77□□□□□ -0.69
KRTAP3-1Q9BYR8 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC10.77□□□□□ -0.69
KRTAP3-1Q9BYR8 AL117332.1-201ENST00000622628 974 ntBASIC10.77□□□□□ -0.69
KRTAP3-1Q9BYR8 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC10.77□□□□□ -0.69
KRTAP3-1Q9BYR8 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
KRTAP3-1Q9BYR8 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
KRTAP3-1Q9BYR8 AP005212.1-201ENST00000581547 1997 ntBASIC10.77□□□□□ -0.69
KRTAP3-1Q9BYR8 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
KRTAP3-1Q9BYR8 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
KRTAP3-1Q9BYR8 AC073314.1-201ENST00000568729 2216 ntBASIC10.77□□□□□ -0.69
KRTAP3-1Q9BYR8 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
KRTAP3-1Q9BYR8 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
KRTAP3-1Q9BYR8 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
KRTAP3-1Q9BYR8 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
KRTAP3-1Q9BYR8 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
KRTAP3-1Q9BYR8 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
KRTAP3-1Q9BYR8 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
KRTAP3-1Q9BYR8 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
KRTAP3-1Q9BYR8 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
KRTAP3-1Q9BYR8 PLK5-205ENST00000642079 1969 ntBASIC10.76□□□□□ -0.69
KRTAP3-1Q9BYR8 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC10.76□□□□□ -0.69
KRTAP3-1Q9BYR8 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
KRTAP3-1Q9BYR8 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
KRTAP3-1Q9BYR8 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC10.76□□□□□ -0.69
KRTAP3-1Q9BYR8 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
KRTAP3-1Q9BYR8 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
KRTAP3-1Q9BYR8 DCD-201ENST00000293371 645 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
KRTAP3-1Q9BYR8 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
KRTAP3-1Q9BYR8 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
KRTAP3-1Q9BYR8 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC10.76□□□□□ -0.69
KRTAP3-1Q9BYR8 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC10.76□□□□□ -0.69
KRTAP3-1Q9BYR8 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
KRTAP3-1Q9BYR8 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC10.76□□□□□ -0.69
KRTAP3-1Q9BYR8 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC10.76□□□□□ -0.69
KRTAP3-1Q9BYR8 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
KRTAP3-1Q9BYR8 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC10.76□□□□□ -0.69
KRTAP3-1Q9BYR8 GABARAPL3-202ENST00000624044 1851 ntBASIC10.76□□□□□ -0.69
KRTAP3-1Q9BYR8 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
KRTAP3-1Q9BYR8 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
KRTAP3-1Q9BYR8 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC10.76□□□□□ -0.69
KRTAP3-1Q9BYR8 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
KRTAP3-1Q9BYR8 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
KRTAP3-1Q9BYR8 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
KRTAP3-1Q9BYR8 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
KRTAP3-1Q9BYR8 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
KRTAP3-1Q9BYR8 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
KRTAP3-1Q9BYR8 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
KRTAP3-1Q9BYR8 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC10.75□□□□□ -0.69
KRTAP3-1Q9BYR8 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
KRTAP3-1Q9BYR8 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
KRTAP3-1Q9BYR8 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC10.75□□□□□ -0.69
KRTAP3-1Q9BYR8 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
KRTAP3-1Q9BYR8 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
KRTAP3-1Q9BYR8 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC10.75□□□□□ -0.69
KRTAP3-1Q9BYR8 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
KRTAP3-1Q9BYR8 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC10.75□□□□□ -0.69
KRTAP3-1Q9BYR8 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC10.75□□□□□ -0.69
KRTAP3-1Q9BYR8 RBM38-205ENST00000440234 686 ntTSL 2 BASIC10.75□□□□□ -0.69
KRTAP3-1Q9BYR8 AC239859.2-201ENST00000444165 318 ntBASIC10.75□□□□□ -0.69
KRTAP3-1Q9BYR8 AL035078.1-201ENST00000531962 820 ntTSL 5 BASIC10.75□□□□□ -0.69
KRTAP3-1Q9BYR8 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
KRTAP3-1Q9BYR8 AC068587.7-201ENST00000641602 218 ntBASIC10.75□□□□□ -0.69
KRTAP3-1Q9BYR8 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC10.75□□□□□ -0.69
KRTAP3-1Q9BYR8 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
KRTAP3-1Q9BYR8 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
KRTAP3-1Q9BYR8 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
KRTAP3-1Q9BYR8 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC10.75□□□□□ -0.69
KRTAP3-1Q9BYR8 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms