Protein–RNA interactions for Protein: Q99884

SLC6A7, Sodium-dependent proline transporter, humanhuman

Predictions only

Length 636 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A7Q99884 RASA4CP-201ENST00000424092 1398 ntBASIC18.45■□□□□ 0.54
SLC6A7Q99884 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
SLC6A7Q99884 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SLC6A7Q99884 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
SLC6A7Q99884 ANKRD20A6P-201ENST00000618763 204 ntBASIC18.45■□□□□ 0.54
SLC6A7Q99884 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC18.45■□□□□ 0.54
SLC6A7Q99884 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SLC6A7Q99884 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SLC6A7Q99884 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC18.45■□□□□ 0.54
SLC6A7Q99884 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC18.45■□□□□ 0.54
SLC6A7Q99884 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SLC6A7Q99884 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SLC6A7Q99884 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
SLC6A7Q99884 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC18.44■□□□□ 0.54
SLC6A7Q99884 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SLC6A7Q99884 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
SLC6A7Q99884 AC244015.2-201ENST00000616358 1861 ntBASIC18.44■□□□□ 0.54
SLC6A7Q99884 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC18.44■□□□□ 0.54
SLC6A7Q99884 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SLC6A7Q99884 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC18.44■□□□□ 0.54
SLC6A7Q99884 AC011298.3-201ENST00000615796 283 ntBASIC18.44■□□□□ 0.54
SLC6A7Q99884 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SLC6A7Q99884 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SLC6A7Q99884 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SLC6A7Q99884 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC18.44■□□□□ 0.54
SLC6A7Q99884 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
SLC6A7Q99884 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
SLC6A7Q99884 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SLC6A7Q99884 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC18.43■□□□□ 0.54
SLC6A7Q99884 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SLC6A7Q99884 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC18.43■□□□□ 0.54
SLC6A7Q99884 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SLC6A7Q99884 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
SLC6A7Q99884 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
SLC6A7Q99884 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SLC6A7Q99884 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC18.43■□□□□ 0.54
SLC6A7Q99884 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC18.43■□□□□ 0.54
SLC6A7Q99884 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
SLC6A7Q99884 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SLC6A7Q99884 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC18.43■□□□□ 0.54
SLC6A7Q99884 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SLC6A7Q99884 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
SLC6A7Q99884 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
SLC6A7Q99884 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SLC6A7Q99884 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SLC6A7Q99884 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC18.43■□□□□ 0.54
SLC6A7Q99884 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SLC6A7Q99884 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
SLC6A7Q99884 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC18.42■□□□□ 0.54
SLC6A7Q99884 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SLC6A7Q99884 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
SLC6A7Q99884 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
SLC6A7Q99884 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SLC6A7Q99884 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SLC6A7Q99884 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SLC6A7Q99884 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC18.42■□□□□ 0.54
SLC6A7Q99884 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
SLC6A7Q99884 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SLC6A7Q99884 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
SLC6A7Q99884 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SLC6A7Q99884 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
SLC6A7Q99884 PARL-206ENST00000435888 1098 ntTSL 5 BASIC18.42■□□□□ 0.54
SLC6A7Q99884 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC18.42■□□□□ 0.54
SLC6A7Q99884 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC18.42■□□□□ 0.54
SLC6A7Q99884 AL138724.1-201ENST00000606771 1088 ntBASIC18.42■□□□□ 0.54
SLC6A7Q99884 MIR6821-201ENST00000617625 74 ntBASIC18.42■□□□□ 0.54
SLC6A7Q99884 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC18.42■□□□□ 0.54
SLC6A7Q99884 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
SLC6A7Q99884 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
SLC6A7Q99884 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SLC6A7Q99884 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SLC6A7Q99884 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
SLC6A7Q99884 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
SLC6A7Q99884 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC18.41■□□□□ 0.54
SLC6A7Q99884 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SLC6A7Q99884 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
SLC6A7Q99884 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC18.41■□□□□ 0.54
SLC6A7Q99884 AC099791.1-201ENST00000416440 715 ntBASIC18.41■□□□□ 0.54
SLC6A7Q99884 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC18.41■□□□□ 0.54
SLC6A7Q99884 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
SLC6A7Q99884 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC18.41■□□□□ 0.54
SLC6A7Q99884 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SLC6A7Q99884 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
SLC6A7Q99884 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SLC6A7Q99884 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC18.41■□□□□ 0.54
SLC6A7Q99884 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SLC6A7Q99884 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
SLC6A7Q99884 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SLC6A7Q99884 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC18.4■□□□□ 0.54
SLC6A7Q99884 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SLC6A7Q99884 LINC01960-201ENST00000563759 1884 ntBASIC18.4■□□□□ 0.54
SLC6A7Q99884 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC18.4■□□□□ 0.54
SLC6A7Q99884 AC097381.1-201ENST00000429019 1296 ntBASIC18.4■□□□□ 0.54
SLC6A7Q99884 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
SLC6A7Q99884 AC087623.3-201ENST00000607047 1098 ntBASIC18.4■□□□□ 0.54
SLC6A7Q99884 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
SLC6A7Q99884 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC18.4■□□□□ 0.54
SLC6A7Q99884 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SLC6A7Q99884 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SLC6A7Q99884 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 59 ms