Protein–RNA interactions for Protein: Q99643

SDHC, Succinate dehydrogenase cytochrome b560 subunit, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHCQ99643 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC18.42■□□□□ 0.54
SDHCQ99643 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
SDHCQ99643 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SDHCQ99643 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
SDHCQ99643 FP325331.1-202ENST00000623531 1380 ntBASIC18.42■□□□□ 0.54
SDHCQ99643 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SDHCQ99643 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SDHCQ99643 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SDHCQ99643 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SDHCQ99643 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
SDHCQ99643 USP39-204ENST00000409766 2033 ntTSL 2 BASIC18.41■□□□□ 0.54
SDHCQ99643 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
SDHCQ99643 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
SDHCQ99643 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
SDHCQ99643 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SDHCQ99643 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC18.41■□□□□ 0.54
SDHCQ99643 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SDHCQ99643 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
SDHCQ99643 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC18.41■□□□□ 0.54
SDHCQ99643 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
SDHCQ99643 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
SDHCQ99643 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC18.4■□□□□ 0.54
SDHCQ99643 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
SDHCQ99643 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
SDHCQ99643 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
SDHCQ99643 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SDHCQ99643 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SDHCQ99643 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
SDHCQ99643 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SDHCQ99643 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SDHCQ99643 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SDHCQ99643 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
SDHCQ99643 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
SDHCQ99643 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
SDHCQ99643 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC18.4■□□□□ 0.54
SDHCQ99643 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC18.4■□□□□ 0.54
SDHCQ99643 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC18.4■□□□□ 0.54
SDHCQ99643 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SDHCQ99643 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SDHCQ99643 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SDHCQ99643 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC18.4■□□□□ 0.54
SDHCQ99643 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
SDHCQ99643 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
SDHCQ99643 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
SDHCQ99643 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
SDHCQ99643 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC18.39■□□□□ 0.54
SDHCQ99643 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC18.39■□□□□ 0.53
SDHCQ99643 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SDHCQ99643 AF131216.4-201ENST00000638924 1588 ntBASIC18.39■□□□□ 0.53
SDHCQ99643 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
SDHCQ99643 PLK5-205ENST00000642079 1969 ntBASIC18.39■□□□□ 0.53
SDHCQ99643 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SDHCQ99643 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SDHCQ99643 LONRF2P2-201ENST00000439212 571 ntBASIC18.39■□□□□ 0.53
SDHCQ99643 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SDHCQ99643 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SDHCQ99643 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC18.39■□□□□ 0.53
SDHCQ99643 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC18.39■□□□□ 0.53
SDHCQ99643 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC18.39■□□□□ 0.53
SDHCQ99643 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SDHCQ99643 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SDHCQ99643 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SDHCQ99643 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SDHCQ99643 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SDHCQ99643 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SDHCQ99643 AC116562.4-201ENST00000641316 2276 ntBASIC18.38■□□□□ 0.53
SDHCQ99643 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
SDHCQ99643 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
SDHCQ99643 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SDHCQ99643 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC18.38■□□□□ 0.53
SDHCQ99643 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SDHCQ99643 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SDHCQ99643 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SDHCQ99643 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SDHCQ99643 MLEC-202ENST00000412616 841 ntTSL 3 BASIC18.38■□□□□ 0.53
SDHCQ99643 SPCS2P3-201ENST00000500401 656 ntBASIC18.38■□□□□ 0.53
SDHCQ99643 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SDHCQ99643 AC016575.1-201ENST00000607026 382 ntBASIC18.38■□□□□ 0.53
SDHCQ99643 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SDHCQ99643 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
SDHCQ99643 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SDHCQ99643 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SDHCQ99643 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SDHCQ99643 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC18.38■□□□□ 0.53
SDHCQ99643 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SDHCQ99643 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SDHCQ99643 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SDHCQ99643 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SDHCQ99643 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC18.37■□□□□ 0.53
SDHCQ99643 AC022413.1-201ENST00000624602 984 ntBASIC18.37■□□□□ 0.53
SDHCQ99643 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
SDHCQ99643 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SDHCQ99643 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SDHCQ99643 AC004687.1-201ENST00000579003 1625 ntBASIC18.37■□□□□ 0.53
SDHCQ99643 AL162377.1-201ENST00000618844 1793 ntBASIC18.37■□□□□ 0.53
SDHCQ99643 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SDHCQ99643 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC18.37■□□□□ 0.53
SDHCQ99643 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SDHCQ99643 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC18.37■□□□□ 0.53
SDHCQ99643 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms