Protein–RNA interactions for Protein: Q8TBE3

FNDC9, Fibronectin type III domain-containing protein 9, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC9Q8TBE3 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
FNDC9Q8TBE3 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
FNDC9Q8TBE3 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
FNDC9Q8TBE3 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC19.12■□□□□ 0.65
FNDC9Q8TBE3 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
FNDC9Q8TBE3 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
FNDC9Q8TBE3 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
FNDC9Q8TBE3 KRT87P-202ENST00000534226 1464 ntBASIC19.12■□□□□ 0.65
FNDC9Q8TBE3 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
FNDC9Q8TBE3 TESC-206ENST00000541210 936 ntTSL 3 BASIC19.12■□□□□ 0.65
FNDC9Q8TBE3 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
FNDC9Q8TBE3 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
FNDC9Q8TBE3 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
FNDC9Q8TBE3 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
FNDC9Q8TBE3 AC233723.2-201ENST00000623798 2106 ntBASIC19.12■□□□□ 0.65
FNDC9Q8TBE3 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
FNDC9Q8TBE3 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
FNDC9Q8TBE3 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
FNDC9Q8TBE3 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
FNDC9Q8TBE3 AP006587.3-201ENST00000525742 1516 ntBASIC19.11■□□□□ 0.65
FNDC9Q8TBE3 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
FNDC9Q8TBE3 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
FNDC9Q8TBE3 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC19.11■□□□□ 0.65
FNDC9Q8TBE3 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
FNDC9Q8TBE3 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC19.11■□□□□ 0.65
FNDC9Q8TBE3 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC19.11■□□□□ 0.65
FNDC9Q8TBE3 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
FNDC9Q8TBE3 AC092437.1-201ENST00000624794 1048 ntBASIC19.11■□□□□ 0.65
FNDC9Q8TBE3 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
FNDC9Q8TBE3 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
FNDC9Q8TBE3 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
FNDC9Q8TBE3 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
FNDC9Q8TBE3 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
FNDC9Q8TBE3 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
FNDC9Q8TBE3 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
FNDC9Q8TBE3 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC19.1■□□□□ 0.65
FNDC9Q8TBE3 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
FNDC9Q8TBE3 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC19.1■□□□□ 0.65
FNDC9Q8TBE3 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
FNDC9Q8TBE3 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
FNDC9Q8TBE3 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC19.1■□□□□ 0.65
FNDC9Q8TBE3 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
FNDC9Q8TBE3 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
FNDC9Q8TBE3 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
FNDC9Q8TBE3 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC19.1■□□□□ 0.65
FNDC9Q8TBE3 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC19.1■□□□□ 0.65
FNDC9Q8TBE3 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC19.1■□□□□ 0.65
FNDC9Q8TBE3 AL137784.2-201ENST00000607332 1000 ntBASIC19.1■□□□□ 0.65
FNDC9Q8TBE3 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
FNDC9Q8TBE3 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC19.1■□□□□ 0.65
FNDC9Q8TBE3 MFF-207ENST00000409565 1548 ntTSL 2 BASIC19.1■□□□□ 0.65
FNDC9Q8TBE3 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
FNDC9Q8TBE3 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC19.09■□□□□ 0.65
FNDC9Q8TBE3 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
FNDC9Q8TBE3 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
FNDC9Q8TBE3 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC19.09■□□□□ 0.65
FNDC9Q8TBE3 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC19.09■□□□□ 0.65
FNDC9Q8TBE3 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
FNDC9Q8TBE3 FXN-202ENST00000396364 980 ntTSL 5 BASIC19.09■□□□□ 0.65
FNDC9Q8TBE3 KRT19P1-201ENST00000405746 1186 ntBASIC19.09■□□□□ 0.65
FNDC9Q8TBE3 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
FNDC9Q8TBE3 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC19.09■□□□□ 0.65
FNDC9Q8TBE3 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC19.09■□□□□ 0.65
FNDC9Q8TBE3 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC19.09■□□□□ 0.65
FNDC9Q8TBE3 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
FNDC9Q8TBE3 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC19.09■□□□□ 0.65
FNDC9Q8TBE3 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
FNDC9Q8TBE3 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
FNDC9Q8TBE3 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
FNDC9Q8TBE3 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
FNDC9Q8TBE3 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC19.09■□□□□ 0.65
FNDC9Q8TBE3 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
FNDC9Q8TBE3 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
FNDC9Q8TBE3 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
FNDC9Q8TBE3 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
FNDC9Q8TBE3 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC19.08■□□□□ 0.64
FNDC9Q8TBE3 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
FNDC9Q8TBE3 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
FNDC9Q8TBE3 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC19.08■□□□□ 0.64
FNDC9Q8TBE3 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC19.08■□□□□ 0.64
FNDC9Q8TBE3 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC19.08■□□□□ 0.64
FNDC9Q8TBE3 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.64
FNDC9Q8TBE3 DBI-210ENST00000542275 757 ntTSL 5 BASIC19.08■□□□□ 0.64
FNDC9Q8TBE3 AC137761.2-201ENST00000561729 223 ntBASIC19.08■□□□□ 0.64
FNDC9Q8TBE3 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC19.08■□□□□ 0.64
FNDC9Q8TBE3 AC145350.3-201ENST00000569033 163 ntBASIC19.08■□□□□ 0.64
FNDC9Q8TBE3 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
FNDC9Q8TBE3 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC19.08■□□□□ 0.64
FNDC9Q8TBE3 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
FNDC9Q8TBE3 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
FNDC9Q8TBE3 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC19.08■□□□□ 0.64
FNDC9Q8TBE3 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC19.08■□□□□ 0.64
FNDC9Q8TBE3 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC19.07■□□□□ 0.64
FNDC9Q8TBE3 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC19.07■□□□□ 0.64
FNDC9Q8TBE3 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
FNDC9Q8TBE3 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
FNDC9Q8TBE3 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
FNDC9Q8TBE3 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
FNDC9Q8TBE3 ME3-201ENST00000323418 1068 ntTSL 5 BASIC19.07■□□□□ 0.64
FNDC9Q8TBE3 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms