Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
CLDND2Q8NHS1 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CLDND2Q8NHS1 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLDND2Q8NHS1 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLDND2Q8NHS1 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC18.04■□□□□ 0.48
CLDND2Q8NHS1 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
CLDND2Q8NHS1 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
CLDND2Q8NHS1 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC18.04■□□□□ 0.48
CLDND2Q8NHS1 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC18.04■□□□□ 0.48
CLDND2Q8NHS1 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
CLDND2Q8NHS1 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC18.04■□□□□ 0.48
CLDND2Q8NHS1 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLDND2Q8NHS1 KRT19P1-201ENST00000405746 1186 ntBASIC18.04■□□□□ 0.48
CLDND2Q8NHS1 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CLDND2Q8NHS1 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC18.04■□□□□ 0.48
CLDND2Q8NHS1 CPT2-209ENST00000636935 803 ntTSL 5 BASIC18.04■□□□□ 0.48
CLDND2Q8NHS1 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLDND2Q8NHS1 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC18.04■□□□□ 0.48
CLDND2Q8NHS1 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLDND2Q8NHS1 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLDND2Q8NHS1 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CLDND2Q8NHS1 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLDND2Q8NHS1 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLDND2Q8NHS1 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
CLDND2Q8NHS1 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
CLDND2Q8NHS1 LINC01960-201ENST00000563759 1884 ntBASIC18.03■□□□□ 0.48
CLDND2Q8NHS1 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLDND2Q8NHS1 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLDND2Q8NHS1 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLDND2Q8NHS1 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLDND2Q8NHS1 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CLDND2Q8NHS1 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC18.03■□□□□ 0.48
CLDND2Q8NHS1 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC18.03■□□□□ 0.48
CLDND2Q8NHS1 TESC-206ENST00000541210 936 ntTSL 3 BASIC18.03■□□□□ 0.48
CLDND2Q8NHS1 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC18.03■□□□□ 0.48
CLDND2Q8NHS1 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLDND2Q8NHS1 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC18.03■□□□□ 0.48
CLDND2Q8NHS1 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
CLDND2Q8NHS1 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
CLDND2Q8NHS1 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC18.02■□□□□ 0.48
CLDND2Q8NHS1 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC18.02■□□□□ 0.48
CLDND2Q8NHS1 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
CLDND2Q8NHS1 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC18.02■□□□□ 0.48
CLDND2Q8NHS1 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
CLDND2Q8NHS1 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
CLDND2Q8NHS1 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
CLDND2Q8NHS1 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CLDND2Q8NHS1 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC18.02■□□□□ 0.48
CLDND2Q8NHS1 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CLDND2Q8NHS1 HSCB-202ENST00000398941 955 ntTSL 2 BASIC18.02■□□□□ 0.48
CLDND2Q8NHS1 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CLDND2Q8NHS1 AC080038.1-201ENST00000611274 1154 ntBASIC18.02■□□□□ 0.48
CLDND2Q8NHS1 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CLDND2Q8NHS1 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
CLDND2Q8NHS1 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC18.02■□□□□ 0.47
CLDND2Q8NHS1 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CLDND2Q8NHS1 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC18.01■□□□□ 0.47
CLDND2Q8NHS1 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC18.01■□□□□ 0.47
CLDND2Q8NHS1 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CLDND2Q8NHS1 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CLDND2Q8NHS1 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CLDND2Q8NHS1 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CLDND2Q8NHS1 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC18.01■□□□□ 0.47
CLDND2Q8NHS1 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
CLDND2Q8NHS1 AC009237.3-201ENST00000393279 1427 ntBASIC18.01■□□□□ 0.47
CLDND2Q8NHS1 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CLDND2Q8NHS1 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CLDND2Q8NHS1 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC18.01■□□□□ 0.47
CLDND2Q8NHS1 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC18.01■□□□□ 0.47
CLDND2Q8NHS1 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC18.01■□□□□ 0.47
CLDND2Q8NHS1 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC18.01■□□□□ 0.47
CLDND2Q8NHS1 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC18.01■□□□□ 0.47
CLDND2Q8NHS1 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC18.01■□□□□ 0.47
CLDND2Q8NHS1 AC005224.4-201ENST00000583262 1652 ntBASIC18.01■□□□□ 0.47
CLDND2Q8NHS1 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
CLDND2Q8NHS1 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CLDND2Q8NHS1 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CLDND2Q8NHS1 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
CLDND2Q8NHS1 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
CLDND2Q8NHS1 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CLDND2Q8NHS1 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CLDND2Q8NHS1 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC18■□□□□ 0.47
CLDND2Q8NHS1 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC18■□□□□ 0.47
CLDND2Q8NHS1 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
CLDND2Q8NHS1 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
CLDND2Q8NHS1 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC18■□□□□ 0.47
CLDND2Q8NHS1 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC18■□□□□ 0.47
CLDND2Q8NHS1 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC18■□□□□ 0.47
CLDND2Q8NHS1 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
CLDND2Q8NHS1 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC18■□□□□ 0.47
CLDND2Q8NHS1 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CLDND2Q8NHS1 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CLDND2Q8NHS1 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CLDND2Q8NHS1 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
CLDND2Q8NHS1 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC17.99■□□□□ 0.47
CLDND2Q8NHS1 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CLDND2Q8NHS1 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
CLDND2Q8NHS1 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
CLDND2Q8NHS1 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CLDND2Q8NHS1 GAS2L1P2-201ENST00000436355 1356 ntBASIC17.99■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms