Protein–RNA interactions for Protein: Q8N752

CSNK1A1L, Casein kinase I isoform alpha-like, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1LQ8N752 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
CSNK1A1LQ8N752 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC20.28■□□□□ 0.84
CSNK1A1LQ8N752 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CSNK1A1LQ8N752 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CSNK1A1LQ8N752 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
CSNK1A1LQ8N752 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC20.28■□□□□ 0.84
CSNK1A1LQ8N752 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CSNK1A1LQ8N752 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CSNK1A1LQ8N752 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CSNK1A1LQ8N752 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
CSNK1A1LQ8N752 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CSNK1A1LQ8N752 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CSNK1A1LQ8N752 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CSNK1A1LQ8N752 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC20.27■□□□□ 0.84
CSNK1A1LQ8N752 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CSNK1A1LQ8N752 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CSNK1A1LQ8N752 AC003102.1-202ENST00000563394 1796 ntBASIC20.27■□□□□ 0.84
CSNK1A1LQ8N752 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CSNK1A1LQ8N752 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CSNK1A1LQ8N752 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CSNK1A1LQ8N752 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC20.27■□□□□ 0.84
CSNK1A1LQ8N752 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC20.27■□□□□ 0.84
CSNK1A1LQ8N752 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC20.27■□□□□ 0.84
CSNK1A1LQ8N752 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC20.27■□□□□ 0.84
CSNK1A1LQ8N752 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC20.27■□□□□ 0.84
CSNK1A1LQ8N752 AC104187.1-201ENST00000607510 612 ntBASIC20.27■□□□□ 0.84
CSNK1A1LQ8N752 AC092666.2-201ENST00000613287 246 ntBASIC20.27■□□□□ 0.84
CSNK1A1LQ8N752 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CSNK1A1LQ8N752 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.83
CSNK1A1LQ8N752 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
CSNK1A1LQ8N752 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CSNK1A1LQ8N752 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CSNK1A1LQ8N752 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC20.26■□□□□ 0.83
CSNK1A1LQ8N752 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CSNK1A1LQ8N752 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CSNK1A1LQ8N752 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CSNK1A1LQ8N752 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC20.26■□□□□ 0.83
CSNK1A1LQ8N752 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CSNK1A1LQ8N752 AC022517.1-201ENST00000592429 346 ntBASIC20.26■□□□□ 0.83
CSNK1A1LQ8N752 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
CSNK1A1LQ8N752 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CSNK1A1LQ8N752 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
CSNK1A1LQ8N752 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
CSNK1A1LQ8N752 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC20.26■□□□□ 0.83
CSNK1A1LQ8N752 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CSNK1A1LQ8N752 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CSNK1A1LQ8N752 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC20.25■□□□□ 0.83
CSNK1A1LQ8N752 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CSNK1A1LQ8N752 SERP1-208ENST00000491660 830 ntTSL 2 BASIC20.25■□□□□ 0.83
CSNK1A1LQ8N752 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CSNK1A1LQ8N752 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CSNK1A1LQ8N752 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CSNK1A1LQ8N752 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CSNK1A1LQ8N752 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC20.24■□□□□ 0.83
CSNK1A1LQ8N752 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CSNK1A1LQ8N752 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
CSNK1A1LQ8N752 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CSNK1A1LQ8N752 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC20.24■□□□□ 0.83
CSNK1A1LQ8N752 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC20.24■□□□□ 0.83
CSNK1A1LQ8N752 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CSNK1A1LQ8N752 C11orf96-202ENST00000528572 1834 ntBASIC20.24■□□□□ 0.83
CSNK1A1LQ8N752 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CSNK1A1LQ8N752 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CSNK1A1LQ8N752 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
CSNK1A1LQ8N752 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CSNK1A1LQ8N752 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CSNK1A1LQ8N752 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
CSNK1A1LQ8N752 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CSNK1A1LQ8N752 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC20.23■□□□□ 0.83
CSNK1A1LQ8N752 AC010542.4-201ENST00000563151 1910 ntBASIC20.23■□□□□ 0.83
CSNK1A1LQ8N752 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CSNK1A1LQ8N752 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC20.23■□□□□ 0.83
CSNK1A1LQ8N752 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CSNK1A1LQ8N752 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC20.23■□□□□ 0.83
CSNK1A1LQ8N752 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CSNK1A1LQ8N752 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CSNK1A1LQ8N752 EEF1DP3-203ENST00000566025 782 ntBASIC20.23■□□□□ 0.83
CSNK1A1LQ8N752 AC053503.5-201ENST00000601508 636 ntBASIC20.23■□□□□ 0.83
CSNK1A1LQ8N752 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CSNK1A1LQ8N752 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC20.23■□□□□ 0.83
CSNK1A1LQ8N752 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CSNK1A1LQ8N752 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CSNK1A1LQ8N752 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CSNK1A1LQ8N752 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CSNK1A1LQ8N752 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CSNK1A1LQ8N752 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CSNK1A1LQ8N752 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC20.22■□□□□ 0.83
CSNK1A1LQ8N752 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CSNK1A1LQ8N752 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC20.22■□□□□ 0.83
CSNK1A1LQ8N752 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CSNK1A1LQ8N752 DBI-210ENST00000542275 757 ntTSL 5 BASIC20.22■□□□□ 0.83
CSNK1A1LQ8N752 AC137761.2-201ENST00000561729 223 ntBASIC20.22■□□□□ 0.83
CSNK1A1LQ8N752 AC145350.3-201ENST00000569033 163 ntBASIC20.22■□□□□ 0.83
CSNK1A1LQ8N752 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC20.22■□□□□ 0.83
CSNK1A1LQ8N752 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC20.22■□□□□ 0.83
CSNK1A1LQ8N752 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CSNK1A1LQ8N752 EP400NL-214ENST00000641289 2402 ntBASIC20.22■□□□□ 0.83
CSNK1A1LQ8N752 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CSNK1A1LQ8N752 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CSNK1A1LQ8N752 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms