Protein–RNA interactions for Protein: Q8N6Y1

PCDH20, Protocadherin-20, humanhuman

Known RBP Predictions only

Length 951 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH20Q8N6Y1 AC080038.3-201ENST00000623346 1952 ntBASIC21.71■■□□□ 1.07
PCDH20Q8N6Y1 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
PCDH20Q8N6Y1 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PCDH20Q8N6Y1 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC21.71■■□□□ 1.07
PCDH20Q8N6Y1 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC21.71■■□□□ 1.07
PCDH20Q8N6Y1 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
PCDH20Q8N6Y1 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC21.71■■□□□ 1.07
PCDH20Q8N6Y1 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PCDH20Q8N6Y1 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
PCDH20Q8N6Y1 ECEL1P1-201ENST00000373592 1742 ntBASIC21.71■■□□□ 1.07
PCDH20Q8N6Y1 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
PCDH20Q8N6Y1 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PCDH20Q8N6Y1 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC21.71■■□□□ 1.07
PCDH20Q8N6Y1 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PCDH20Q8N6Y1 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
PCDH20Q8N6Y1 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.07
PCDH20Q8N6Y1 MFF-207ENST00000409565 1548 ntTSL 2 BASIC21.7■■□□□ 1.07
PCDH20Q8N6Y1 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PCDH20Q8N6Y1 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
PCDH20Q8N6Y1 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC21.7■■□□□ 1.06
PCDH20Q8N6Y1 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PCDH20Q8N6Y1 EFS-203ENST00000429593 2610 ntTSL 2 BASIC21.7■■□□□ 1.06
PCDH20Q8N6Y1 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC21.7■■□□□ 1.06
PCDH20Q8N6Y1 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC21.7■■□□□ 1.06
PCDH20Q8N6Y1 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC21.7■■□□□ 1.06
PCDH20Q8N6Y1 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC21.7■■□□□ 1.06
PCDH20Q8N6Y1 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC21.7■■□□□ 1.06
PCDH20Q8N6Y1 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC21.7■■□□□ 1.06
PCDH20Q8N6Y1 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
PCDH20Q8N6Y1 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
PCDH20Q8N6Y1 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PCDH20Q8N6Y1 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PCDH20Q8N6Y1 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PCDH20Q8N6Y1 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PCDH20Q8N6Y1 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC21.7■■□□□ 1.06
PCDH20Q8N6Y1 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
PCDH20Q8N6Y1 WWC2-AS2-201ENST00000578387 2183 ntBASIC21.7■■□□□ 1.06
PCDH20Q8N6Y1 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PCDH20Q8N6Y1 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PCDH20Q8N6Y1 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PCDH20Q8N6Y1 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PCDH20Q8N6Y1 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC21.69■■□□□ 1.06
PCDH20Q8N6Y1 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC21.69■■□□□ 1.06
PCDH20Q8N6Y1 KRT19P1-201ENST00000405746 1186 ntBASIC21.69■■□□□ 1.06
PCDH20Q8N6Y1 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PCDH20Q8N6Y1 TESC-206ENST00000541210 936 ntTSL 3 BASIC21.69■■□□□ 1.06
PCDH20Q8N6Y1 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC21.69■■□□□ 1.06
PCDH20Q8N6Y1 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC21.69■■□□□ 1.06
PCDH20Q8N6Y1 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC21.69■■□□□ 1.06
PCDH20Q8N6Y1 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PCDH20Q8N6Y1 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PCDH20Q8N6Y1 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PCDH20Q8N6Y1 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC21.69■■□□□ 1.06
PCDH20Q8N6Y1 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PCDH20Q8N6Y1 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC21.68■■□□□ 1.06
PCDH20Q8N6Y1 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PCDH20Q8N6Y1 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
PCDH20Q8N6Y1 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC21.68■■□□□ 1.06
PCDH20Q8N6Y1 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC21.68■■□□□ 1.06
PCDH20Q8N6Y1 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PCDH20Q8N6Y1 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PCDH20Q8N6Y1 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
PCDH20Q8N6Y1 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
PCDH20Q8N6Y1 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC21.68■■□□□ 1.06
PCDH20Q8N6Y1 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
PCDH20Q8N6Y1 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PCDH20Q8N6Y1 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC21.67■■□□□ 1.06
PCDH20Q8N6Y1 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PCDH20Q8N6Y1 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
PCDH20Q8N6Y1 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PCDH20Q8N6Y1 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
PCDH20Q8N6Y1 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC21.67■■□□□ 1.06
PCDH20Q8N6Y1 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
PCDH20Q8N6Y1 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC21.67■■□□□ 1.06
PCDH20Q8N6Y1 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC21.67■■□□□ 1.06
PCDH20Q8N6Y1 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
PCDH20Q8N6Y1 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PCDH20Q8N6Y1 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
PCDH20Q8N6Y1 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
PCDH20Q8N6Y1 AC092053.2-201ENST00000640557 1818 ntBASIC21.66■■□□□ 1.06
PCDH20Q8N6Y1 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
PCDH20Q8N6Y1 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC21.66■■□□□ 1.06
PCDH20Q8N6Y1 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC21.66■■□□□ 1.06
PCDH20Q8N6Y1 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PCDH20Q8N6Y1 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC21.66■■□□□ 1.06
PCDH20Q8N6Y1 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
PCDH20Q8N6Y1 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
PCDH20Q8N6Y1 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
PCDH20Q8N6Y1 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
PCDH20Q8N6Y1 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PCDH20Q8N6Y1 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
PCDH20Q8N6Y1 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC21.65■■□□□ 1.06
PCDH20Q8N6Y1 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PCDH20Q8N6Y1 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC21.65■■□□□ 1.06
PCDH20Q8N6Y1 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC21.65■■□□□ 1.06
PCDH20Q8N6Y1 IKBKGP1-201ENST00000612193 1073 ntBASIC21.65■■□□□ 1.06
PCDH20Q8N6Y1 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
PCDH20Q8N6Y1 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
PCDH20Q8N6Y1 USP48-205ENST00000421625 2818 ntTSL 2 BASIC21.65■■□□□ 1.06
PCDH20Q8N6Y1 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms