Protein–RNA interactions for Protein: Q71F78

LCA10, Putative lung carcinoma-associated protein 10, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCA10Q71F78 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
LCA10Q71F78 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC11.41□□□□□ -0.58
LCA10Q71F78 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC11.41□□□□□ -0.58
LCA10Q71F78 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
LCA10Q71F78 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
LCA10Q71F78 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
LCA10Q71F78 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
LCA10Q71F78 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
LCA10Q71F78 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
LCA10Q71F78 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.58
LCA10Q71F78 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
LCA10Q71F78 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
LCA10Q71F78 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
LCA10Q71F78 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC11.4□□□□□ -0.58
LCA10Q71F78 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC11.4□□□□□ -0.58
LCA10Q71F78 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
LCA10Q71F78 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
LCA10Q71F78 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
LCA10Q71F78 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
LCA10Q71F78 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC11.4□□□□□ -0.58
LCA10Q71F78 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
LCA10Q71F78 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
LCA10Q71F78 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
LCA10Q71F78 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
LCA10Q71F78 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
LCA10Q71F78 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC11.4□□□□□ -0.58
LCA10Q71F78 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
LCA10Q71F78 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
LCA10Q71F78 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
LCA10Q71F78 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
LCA10Q71F78 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
LCA10Q71F78 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.59
LCA10Q71F78 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC11.4□□□□□ -0.59
LCA10Q71F78 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
LCA10Q71F78 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
LCA10Q71F78 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
LCA10Q71F78 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
LCA10Q71F78 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
LCA10Q71F78 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC11.39□□□□□ -0.59
LCA10Q71F78 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC11.39□□□□□ -0.59
LCA10Q71F78 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
LCA10Q71F78 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC11.39□□□□□ -0.59
LCA10Q71F78 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
LCA10Q71F78 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
LCA10Q71F78 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
LCA10Q71F78 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC11.39□□□□□ -0.59
LCA10Q71F78 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
LCA10Q71F78 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
LCA10Q71F78 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
LCA10Q71F78 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
LCA10Q71F78 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
LCA10Q71F78 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
LCA10Q71F78 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
LCA10Q71F78 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC11.39□□□□□ -0.59
LCA10Q71F78 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC11.39□□□□□ -0.59
LCA10Q71F78 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
LCA10Q71F78 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
LCA10Q71F78 HES4-202ENST00000428771 1040 ntTSL 2 BASIC11.39□□□□□ -0.59
LCA10Q71F78 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
LCA10Q71F78 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC11.39□□□□□ -0.59
LCA10Q71F78 HES4-204ENST00000484667 667 ntTSL 3 BASIC11.39□□□□□ -0.59
LCA10Q71F78 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC11.39□□□□□ -0.59
LCA10Q71F78 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
LCA10Q71F78 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
LCA10Q71F78 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
LCA10Q71F78 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC11.39□□□□□ -0.59
LCA10Q71F78 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
LCA10Q71F78 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
LCA10Q71F78 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
LCA10Q71F78 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
LCA10Q71F78 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
LCA10Q71F78 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC11.39□□□□□ -0.59
LCA10Q71F78 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
LCA10Q71F78 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC11.39□□□□□ -0.59
LCA10Q71F78 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
LCA10Q71F78 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
LCA10Q71F78 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
LCA10Q71F78 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC11.38□□□□□ -0.59
LCA10Q71F78 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
LCA10Q71F78 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
LCA10Q71F78 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC11.38□□□□□ -0.59
LCA10Q71F78 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
LCA10Q71F78 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
LCA10Q71F78 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC11.38□□□□□ -0.59
LCA10Q71F78 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC11.38□□□□□ -0.59
LCA10Q71F78 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
LCA10Q71F78 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
LCA10Q71F78 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC11.38□□□□□ -0.59
LCA10Q71F78 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
LCA10Q71F78 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
LCA10Q71F78 AC005332.8-201ENST00000622750 2735 ntBASIC11.38□□□□□ -0.59
LCA10Q71F78 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
LCA10Q71F78 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
LCA10Q71F78 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
LCA10Q71F78 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
LCA10Q71F78 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
LCA10Q71F78 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
LCA10Q71F78 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
LCA10Q71F78 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
LCA10Q71F78 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms