Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CKS1BP61024 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CKS1BP61024 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CKS1BP61024 USF2-207ENST00000595068 1612 ntTSL 5 BASIC14.77□□□□□ -0.04
CKS1BP61024 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CKS1BP61024 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CKS1BP61024 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CKS1BP61024 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC14.77□□□□□ -0.04
CKS1BP61024 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC14.77□□□□□ -0.04
CKS1BP61024 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
CKS1BP61024 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC14.77□□□□□ -0.04
CKS1BP61024 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
CKS1BP61024 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC14.77□□□□□ -0.04
CKS1BP61024 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
CKS1BP61024 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC14.77□□□□□ -0.05
CKS1BP61024 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CKS1BP61024 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CKS1BP61024 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CKS1BP61024 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC14.77□□□□□ -0.05
CKS1BP61024 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CKS1BP61024 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CKS1BP61024 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CKS1BP61024 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
CKS1BP61024 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC14.76□□□□□ -0.05
CKS1BP61024 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
CKS1BP61024 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC14.76□□□□□ -0.05
CKS1BP61024 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC14.76□□□□□ -0.05
CKS1BP61024 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
CKS1BP61024 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
CKS1BP61024 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
CKS1BP61024 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
CKS1BP61024 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
CKS1BP61024 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
CKS1BP61024 C11orf96-202ENST00000528572 1834 ntBASIC14.76□□□□□ -0.05
CKS1BP61024 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CKS1BP61024 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CKS1BP61024 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
CKS1BP61024 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CKS1BP61024 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CKS1BP61024 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CKS1BP61024 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC14.76□□□□□ -0.05
CKS1BP61024 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CKS1BP61024 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CKS1BP61024 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC14.76□□□□□ -0.05
CKS1BP61024 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CKS1BP61024 AF131216.4-201ENST00000638924 1588 ntBASIC14.76□□□□□ -0.05
CKS1BP61024 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CKS1BP61024 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC14.76□□□□□ -0.05
CKS1BP61024 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
CKS1BP61024 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CKS1BP61024 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CKS1BP61024 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CKS1BP61024 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC14.76□□□□□ -0.05
CKS1BP61024 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC14.75□□□□□ -0.05
CKS1BP61024 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
CKS1BP61024 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
CKS1BP61024 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CKS1BP61024 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CKS1BP61024 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC14.75□□□□□ -0.05
CKS1BP61024 HSD17B1P1-201ENST00000590052 955 ntBASIC14.75□□□□□ -0.05
CKS1BP61024 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CKS1BP61024 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CKS1BP61024 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CKS1BP61024 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
CKS1BP61024 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CKS1BP61024 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CKS1BP61024 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC14.75□□□□□ -0.05
CKS1BP61024 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CKS1BP61024 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CKS1BP61024 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
CKS1BP61024 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CKS1BP61024 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CKS1BP61024 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CKS1BP61024 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC14.75□□□□□ -0.05
CKS1BP61024 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CKS1BP61024 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CKS1BP61024 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CKS1BP61024 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
CKS1BP61024 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
CKS1BP61024 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CKS1BP61024 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
CKS1BP61024 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC14.74□□□□□ -0.05
CKS1BP61024 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
CKS1BP61024 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CKS1BP61024 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CKS1BP61024 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CKS1BP61024 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
CKS1BP61024 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CKS1BP61024 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CKS1BP61024 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC14.74□□□□□ -0.05
CKS1BP61024 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
CKS1BP61024 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CKS1BP61024 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC14.74□□□□□ -0.05
CKS1BP61024 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC14.74□□□□□ -0.05
CKS1BP61024 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CKS1BP61024 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC14.74□□□□□ -0.05
CKS1BP61024 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CKS1BP61024 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CKS1BP61024 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CKS1BP61024 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms