Protein–RNA interactions for Protein: P56748

CLDN8, Claudin-8, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN8P56748 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC20.22■□□□□ 0.83
CLDN8P56748 AP006587.3-201ENST00000525742 1516 ntBASIC20.22■□□□□ 0.83
CLDN8P56748 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC20.22■□□□□ 0.83
CLDN8P56748 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
CLDN8P56748 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CLDN8P56748 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC20.22■□□□□ 0.83
CLDN8P56748 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CLDN8P56748 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
CLDN8P56748 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
CLDN8P56748 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CLDN8P56748 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC20.22■□□□□ 0.83
CLDN8P56748 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC20.22■□□□□ 0.83
CLDN8P56748 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC20.22■□□□□ 0.83
CLDN8P56748 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
CLDN8P56748 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC20.22■□□□□ 0.83
CLDN8P56748 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CLDN8P56748 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC20.22■□□□□ 0.83
CLDN8P56748 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
CLDN8P56748 PARN-205ENST00000539279 1557 ntTSL 2 BASIC20.21■□□□□ 0.83
CLDN8P56748 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CLDN8P56748 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC20.21■□□□□ 0.83
CLDN8P56748 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CLDN8P56748 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CLDN8P56748 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CLDN8P56748 BX842568.3-201ENST00000418104 571 ntBASIC20.21■□□□□ 0.83
CLDN8P56748 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC20.21■□□□□ 0.83
CLDN8P56748 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CLDN8P56748 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
CLDN8P56748 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC20.21■□□□□ 0.83
CLDN8P56748 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC20.21■□□□□ 0.83
CLDN8P56748 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CLDN8P56748 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CLDN8P56748 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
CLDN8P56748 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
CLDN8P56748 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC20.21■□□□□ 0.83
CLDN8P56748 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC20.21■□□□□ 0.83
CLDN8P56748 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC20.21■□□□□ 0.83
CLDN8P56748 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC20.2■□□□□ 0.82
CLDN8P56748 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CLDN8P56748 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
CLDN8P56748 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
CLDN8P56748 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC20.2■□□□□ 0.82
CLDN8P56748 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
CLDN8P56748 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
CLDN8P56748 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CLDN8P56748 AC133561.4-201ENST00000566112 224 ntBASIC20.2■□□□□ 0.82
CLDN8P56748 SMUG1P1-201ENST00000590640 811 ntBASIC20.2■□□□□ 0.82
CLDN8P56748 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC20.2■□□□□ 0.82
CLDN8P56748 AL049796.1-201ENST00000565336 1766 ntBASIC20.2■□□□□ 0.82
CLDN8P56748 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CLDN8P56748 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CLDN8P56748 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
CLDN8P56748 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CLDN8P56748 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
CLDN8P56748 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CLDN8P56748 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC20.19■□□□□ 0.82
CLDN8P56748 AL136116.3-201ENST00000402907 1138 ntBASIC20.19■□□□□ 0.82
CLDN8P56748 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC20.19■□□□□ 0.82
CLDN8P56748 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC20.19■□□□□ 0.82
CLDN8P56748 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC20.19■□□□□ 0.82
CLDN8P56748 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CLDN8P56748 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC20.19■□□□□ 0.82
CLDN8P56748 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
CLDN8P56748 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CLDN8P56748 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
CLDN8P56748 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
CLDN8P56748 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC20.19■□□□□ 0.82
CLDN8P56748 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
CLDN8P56748 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
CLDN8P56748 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC20.18■□□□□ 0.82
CLDN8P56748 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CLDN8P56748 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CLDN8P56748 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC20.18■□□□□ 0.82
CLDN8P56748 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC20.18■□□□□ 0.82
CLDN8P56748 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC20.18■□□□□ 0.82
CLDN8P56748 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CLDN8P56748 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC20.18■□□□□ 0.82
CLDN8P56748 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CLDN8P56748 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC20.18■□□□□ 0.82
CLDN8P56748 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC20.18■□□□□ 0.82
CLDN8P56748 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
CLDN8P56748 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC20.18■□□□□ 0.82
CLDN8P56748 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CLDN8P56748 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC20.18■□□□□ 0.82
CLDN8P56748 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CLDN8P56748 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CLDN8P56748 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC20.17■□□□□ 0.82
CLDN8P56748 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CLDN8P56748 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC20.17■□□□□ 0.82
CLDN8P56748 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC20.17■□□□□ 0.82
CLDN8P56748 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CLDN8P56748 MIR4767-201ENST00000582827 78 ntBASIC20.17■□□□□ 0.82
CLDN8P56748 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CLDN8P56748 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CLDN8P56748 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CLDN8P56748 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
CLDN8P56748 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CLDN8P56748 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CLDN8P56748 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
CLDN8P56748 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms