Protein–RNA interactions for Protein: P38606

ATP6V1A, V-type proton ATPase catalytic subunit A, humanhuman

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V1AP38606 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC27.36■■□□□ 1.97
ATP6V1AP38606 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC27.35■■□□□ 1.97
ATP6V1AP38606 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
ATP6V1AP38606 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
ATP6V1AP38606 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC27.35■■□□□ 1.97
ATP6V1AP38606 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC27.35■■□□□ 1.97
ATP6V1AP38606 AC091874.3-201ENST00000512672 1195 ntBASIC27.35■■□□□ 1.97
ATP6V1AP38606 IRX5-204ENST00000560154 879 ntTSL 5 BASIC27.35■■□□□ 1.97
ATP6V1AP38606 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
ATP6V1AP38606 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC27.35■■□□□ 1.97
ATP6V1AP38606 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
ATP6V1AP38606 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC27.35■■□□□ 1.97
ATP6V1AP38606 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
ATP6V1AP38606 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
ATP6V1AP38606 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC27.34■■□□□ 1.97
ATP6V1AP38606 AP006294.2-201ENST00000641667 209 ntBASIC27.34■■□□□ 1.97
ATP6V1AP38606 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC27.34■■□□□ 1.97
ATP6V1AP38606 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
ATP6V1AP38606 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC27.33■■□□□ 1.97
ATP6V1AP38606 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
ATP6V1AP38606 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC27.33■■□□□ 1.97
ATP6V1AP38606 RNF146-206ENST00000480444 843 ntTSL 2 BASIC27.33■■□□□ 1.97
ATP6V1AP38606 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
ATP6V1AP38606 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
ATP6V1AP38606 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
ATP6V1AP38606 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
ATP6V1AP38606 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
ATP6V1AP38606 AC010980.2-201ENST00000587099 1412 ntBASIC27.33■■□□□ 1.96
ATP6V1AP38606 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC27.32■■□□□ 1.96
ATP6V1AP38606 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
ATP6V1AP38606 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC27.32■■□□□ 1.96
ATP6V1AP38606 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
ATP6V1AP38606 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC27.32■■□□□ 1.96
ATP6V1AP38606 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC27.32■■□□□ 1.96
ATP6V1AP38606 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
ATP6V1AP38606 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC27.32■■□□□ 1.96
ATP6V1AP38606 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC27.32■■□□□ 1.96
ATP6V1AP38606 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
ATP6V1AP38606 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
ATP6V1AP38606 GAS7-202ENST00000396115 929 ntTSL 5 BASIC27.32■■□□□ 1.96
ATP6V1AP38606 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC27.32■■□□□ 1.96
ATP6V1AP38606 ISCU-212ENST00000547005 795 ntTSL 3 BASIC27.32■■□□□ 1.96
ATP6V1AP38606 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC27.32■■□□□ 1.96
ATP6V1AP38606 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC27.32■■□□□ 1.96
ATP6V1AP38606 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
ATP6V1AP38606 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC27.32■■□□□ 1.96
ATP6V1AP38606 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
ATP6V1AP38606 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
ATP6V1AP38606 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
ATP6V1AP38606 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
ATP6V1AP38606 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
ATP6V1AP38606 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
ATP6V1AP38606 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC27.31■■□□□ 1.96
ATP6V1AP38606 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC27.31■■□□□ 1.96
ATP6V1AP38606 POU5F1P4-201ENST00000413175 1085 ntBASIC27.31■■□□□ 1.96
ATP6V1AP38606 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC27.31■■□□□ 1.96
ATP6V1AP38606 AC006058.3-201ENST00000606217 1069 ntBASIC27.31■■□□□ 1.96
ATP6V1AP38606 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
ATP6V1AP38606 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC27.31■■□□□ 1.96
ATP6V1AP38606 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC27.31■■□□□ 1.96
ATP6V1AP38606 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
ATP6V1AP38606 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC27.31■■□□□ 1.96
ATP6V1AP38606 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
ATP6V1AP38606 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
ATP6V1AP38606 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC27.3■■□□□ 1.96
ATP6V1AP38606 MMAB-206ENST00000540016 945 ntTSL 3 BASIC27.3■■□□□ 1.96
ATP6V1AP38606 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC27.3■■□□□ 1.96
ATP6V1AP38606 AL591742.1-201ENST00000604433 565 ntBASIC27.3■■□□□ 1.96
ATP6V1AP38606 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC27.3■■□□□ 1.96
ATP6V1AP38606 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC27.3■■□□□ 1.96
ATP6V1AP38606 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC27.29■■□□□ 1.96
ATP6V1AP38606 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC27.29■■□□□ 1.96
ATP6V1AP38606 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
ATP6V1AP38606 AL158047.1-201ENST00000445918 881 ntBASIC27.29■■□□□ 1.96
ATP6V1AP38606 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC27.29■■□□□ 1.96
ATP6V1AP38606 FGF8-207ENST00000618991 856 ntTSL 3 BASIC27.29■■□□□ 1.96
ATP6V1AP38606 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC27.29■■□□□ 1.96
ATP6V1AP38606 RBM17P2-201ENST00000616397 1405 ntBASIC27.29■■□□□ 1.96
ATP6V1AP38606 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC27.29■■□□□ 1.96
ATP6V1AP38606 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC27.29■■□□□ 1.96
ATP6V1AP38606 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
ATP6V1AP38606 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
ATP6V1AP38606 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC27.29■■□□□ 1.96
ATP6V1AP38606 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
ATP6V1AP38606 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC27.29■■□□□ 1.96
ATP6V1AP38606 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC27.28■■□□□ 1.96
ATP6V1AP38606 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC27.28■■□□□ 1.96
ATP6V1AP38606 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
ATP6V1AP38606 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC27.28■■□□□ 1.96
ATP6V1AP38606 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC27.28■■□□□ 1.96
ATP6V1AP38606 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC27.28■■□□□ 1.96
ATP6V1AP38606 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC27.28■■□□□ 1.96
ATP6V1AP38606 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC27.28■■□□□ 1.96
ATP6V1AP38606 AC128676.1-201ENST00000454392 318 ntBASIC27.28■■□□□ 1.96
ATP6V1AP38606 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC27.28■■□□□ 1.96
ATP6V1AP38606 AC142381.4-202ENST00000563973 229 ntBASIC27.28■■□□□ 1.96
ATP6V1AP38606 AL162412.1-201ENST00000567129 965 ntBASIC27.28■■□□□ 1.96
ATP6V1AP38606 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
ATP6V1AP38606 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
ATP6V1AP38606 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms