Protein–RNA interactions for Protein: P35712

SOX6, Transcription factor SOX-6, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6P35712 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
SOX6P35712 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
SOX6P35712 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
SOX6P35712 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
SOX6P35712 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
SOX6P35712 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
SOX6P35712 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC19■□□□□ 0.63
SOX6P35712 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC19■□□□□ 0.63
SOX6P35712 ATP5G2P3-201ENST00000429083 425 ntBASIC19■□□□□ 0.63
SOX6P35712 AC087393.1-201ENST00000582896 145 ntBASIC19■□□□□ 0.63
SOX6P35712 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC19■□□□□ 0.63
SOX6P35712 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC19■□□□□ 0.63
SOX6P35712 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC19■□□□□ 0.63
SOX6P35712 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC19■□□□□ 0.63
SOX6P35712 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
SOX6P35712 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SOX6P35712 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SOX6P35712 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
SOX6P35712 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC19■□□□□ 0.63
SOX6P35712 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SOX6P35712 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SOX6P35712 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC18.99■□□□□ 0.63
SOX6P35712 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC18.99■□□□□ 0.63
SOX6P35712 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
SOX6P35712 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC18.99■□□□□ 0.63
SOX6P35712 TSPY13P-201ENST00000338964 914 ntBASIC18.99■□□□□ 0.63
SOX6P35712 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC18.99■□□□□ 0.63
SOX6P35712 CA15P2-201ENST00000611168 834 ntBASIC18.99■□□□□ 0.63
SOX6P35712 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
SOX6P35712 LINC01529-204ENST00000636474 1715 ntBASIC18.99■□□□□ 0.63
SOX6P35712 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SOX6P35712 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC18.99■□□□□ 0.63
SOX6P35712 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SOX6P35712 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SOX6P35712 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC18.98■□□□□ 0.63
SOX6P35712 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SOX6P35712 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SOX6P35712 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC18.98■□□□□ 0.63
SOX6P35712 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC18.98■□□□□ 0.63
SOX6P35712 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
SOX6P35712 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC18.98■□□□□ 0.63
SOX6P35712 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SOX6P35712 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
SOX6P35712 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC18.98■□□□□ 0.63
SOX6P35712 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SOX6P35712 IDNK-203ENST00000405990 629 ntTSL 2 BASIC18.98■□□□□ 0.63
SOX6P35712 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC18.98■□□□□ 0.63
SOX6P35712 AC004987.1-201ENST00000428627 508 ntBASIC18.98■□□□□ 0.63
SOX6P35712 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
SOX6P35712 HYI-210ENST00000486909 905 ntTSL 5 BASIC18.98■□□□□ 0.63
SOX6P35712 DUX4L18-201ENST00000553347 1267 ntBASIC18.98■□□□□ 0.63
SOX6P35712 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC18.98■□□□□ 0.63
SOX6P35712 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC18.98■□□□□ 0.63
SOX6P35712 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC18.98■□□□□ 0.63
SOX6P35712 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SOX6P35712 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
SOX6P35712 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
SOX6P35712 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC18.98■□□□□ 0.63
SOX6P35712 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC18.98■□□□□ 0.63
SOX6P35712 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC18.98■□□□□ 0.63
SOX6P35712 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SOX6P35712 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
SOX6P35712 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC18.97■□□□□ 0.63
SOX6P35712 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC18.97■□□□□ 0.63
SOX6P35712 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SOX6P35712 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
SOX6P35712 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SOX6P35712 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
SOX6P35712 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC18.97■□□□□ 0.63
SOX6P35712 AC104564.3-201ENST00000582367 638 ntBASIC18.97■□□□□ 0.63
SOX6P35712 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
SOX6P35712 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SOX6P35712 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
SOX6P35712 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
SOX6P35712 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
SOX6P35712 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC18.97■□□□□ 0.63
SOX6P35712 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
SOX6P35712 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
SOX6P35712 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SOX6P35712 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
SOX6P35712 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.96■□□□□ 0.63
SOX6P35712 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SOX6P35712 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SOX6P35712 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SOX6P35712 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
SOX6P35712 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC18.96■□□□□ 0.63
SOX6P35712 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SOX6P35712 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
SOX6P35712 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
SOX6P35712 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC18.96■□□□□ 0.63
SOX6P35712 AC009086.3-201ENST00000623486 1008 ntBASIC18.96■□□□□ 0.63
SOX6P35712 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC18.96■□□□□ 0.63
SOX6P35712 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SOX6P35712 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SOX6P35712 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SOX6P35712 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC18.96■□□□□ 0.63
SOX6P35712 GABARAPL3-202ENST00000624044 1851 ntBASIC18.96■□□□□ 0.63
SOX6P35712 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SOX6P35712 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
SOX6P35712 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms