Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 SNX3-202ENST00000349379 890 ntTSL 2 BASIC20.99■□□□□ 0.95
COL6A2P12110 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC20.99■□□□□ 0.95
COL6A2P12110 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC20.99■□□□□ 0.95
COL6A2P12110 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
COL6A2P12110 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC20.99■□□□□ 0.95
COL6A2P12110 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
COL6A2P12110 AL049796.1-201ENST00000565336 1766 ntBASIC20.99■□□□□ 0.95
COL6A2P12110 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
COL6A2P12110 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
COL6A2P12110 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC20.99■□□□□ 0.95
COL6A2P12110 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC20.99■□□□□ 0.95
COL6A2P12110 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
COL6A2P12110 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
COL6A2P12110 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
COL6A2P12110 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC20.99■□□□□ 0.95
COL6A2P12110 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC20.98■□□□□ 0.95
COL6A2P12110 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
COL6A2P12110 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
COL6A2P12110 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
COL6A2P12110 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC20.98■□□□□ 0.95
COL6A2P12110 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC20.98■□□□□ 0.95
COL6A2P12110 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
COL6A2P12110 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC20.98■□□□□ 0.95
COL6A2P12110 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
COL6A2P12110 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC20.98■□□□□ 0.95
COL6A2P12110 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
COL6A2P12110 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
COL6A2P12110 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
COL6A2P12110 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC20.97■□□□□ 0.95
COL6A2P12110 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
COL6A2P12110 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
COL6A2P12110 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
COL6A2P12110 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
COL6A2P12110 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC20.97■□□□□ 0.95
COL6A2P12110 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
COL6A2P12110 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC20.97■□□□□ 0.95
COL6A2P12110 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
COL6A2P12110 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC20.97■□□□□ 0.95
COL6A2P12110 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
COL6A2P12110 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC20.97■□□□□ 0.95
COL6A2P12110 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
COL6A2P12110 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC20.96■□□□□ 0.95
COL6A2P12110 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
COL6A2P12110 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC20.96■□□□□ 0.95
COL6A2P12110 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
COL6A2P12110 AP006587.3-201ENST00000525742 1516 ntBASIC20.96■□□□□ 0.95
COL6A2P12110 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
COL6A2P12110 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC20.96■□□□□ 0.95
COL6A2P12110 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
COL6A2P12110 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
COL6A2P12110 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
COL6A2P12110 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.96■□□□□ 0.95
COL6A2P12110 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
COL6A2P12110 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
COL6A2P12110 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
COL6A2P12110 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
COL6A2P12110 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
COL6A2P12110 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
COL6A2P12110 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
COL6A2P12110 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC20.95■□□□□ 0.94
COL6A2P12110 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC20.95■□□□□ 0.94
COL6A2P12110 TRIR-202ENST00000588213 841 ntTSL 3 BASIC20.95■□□□□ 0.94
COL6A2P12110 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC20.95■□□□□ 0.94
COL6A2P12110 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
COL6A2P12110 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
COL6A2P12110 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
COL6A2P12110 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC20.95■□□□□ 0.94
COL6A2P12110 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
COL6A2P12110 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
COL6A2P12110 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
COL6A2P12110 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
COL6A2P12110 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC20.94■□□□□ 0.94
COL6A2P12110 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
COL6A2P12110 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
COL6A2P12110 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
COL6A2P12110 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC20.94■□□□□ 0.94
COL6A2P12110 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC20.94■□□□□ 0.94
COL6A2P12110 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
COL6A2P12110 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC20.94■□□□□ 0.94
COL6A2P12110 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
COL6A2P12110 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
COL6A2P12110 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
COL6A2P12110 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
COL6A2P12110 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
COL6A2P12110 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
COL6A2P12110 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
COL6A2P12110 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
COL6A2P12110 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
COL6A2P12110 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
COL6A2P12110 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
COL6A2P12110 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
COL6A2P12110 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC20.93■□□□□ 0.94
COL6A2P12110 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC20.93■□□□□ 0.94
COL6A2P12110 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC20.93■□□□□ 0.94
COL6A2P12110 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC20.93■□□□□ 0.94
COL6A2P12110 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
COL6A2P12110 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
COL6A2P12110 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
COL6A2P12110 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
COL6A2P12110 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms