Protein–RNA interactions for Protein: P00441

SOD1, Superoxide dismutase [Cu-Zn], humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOD1P00441 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SOD1P00441 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC21.07■□□□□ 0.96
SOD1P00441 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SOD1P00441 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
SOD1P00441 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SOD1P00441 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SOD1P00441 AC138907.5-202ENST00000569484 235 ntBASIC21.07■□□□□ 0.96
SOD1P00441 AC053503.5-201ENST00000601508 636 ntBASIC21.07■□□□□ 0.96
SOD1P00441 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC21.07■□□□□ 0.96
SOD1P00441 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SOD1P00441 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
SOD1P00441 AC010542.4-201ENST00000563151 1910 ntBASIC21.06■□□□□ 0.96
SOD1P00441 AL117328.2-201ENST00000624617 1940 ntBASIC21.06■□□□□ 0.96
SOD1P00441 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC21.06■□□□□ 0.96
SOD1P00441 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SOD1P00441 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC21.06■□□□□ 0.96
SOD1P00441 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SOD1P00441 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SOD1P00441 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SOD1P00441 AC004911.1-201ENST00000416316 871 ntBASIC21.06■□□□□ 0.96
SOD1P00441 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SOD1P00441 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC21.06■□□□□ 0.96
SOD1P00441 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC21.06■□□□□ 0.96
SOD1P00441 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC21.06■□□□□ 0.96
SOD1P00441 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
SOD1P00441 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC21.06■□□□□ 0.96
SOD1P00441 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC21.06■□□□□ 0.96
SOD1P00441 WWOX-218ENST00000627394 894 ntTSL 5 BASIC21.06■□□□□ 0.96
SOD1P00441 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SOD1P00441 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
SOD1P00441 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SOD1P00441 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SOD1P00441 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
SOD1P00441 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
SOD1P00441 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SOD1P00441 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SOD1P00441 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC21.05■□□□□ 0.96
SOD1P00441 AC010141.2-201ENST00000452426 721 ntBASIC21.05■□□□□ 0.96
SOD1P00441 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC21.05■□□□□ 0.96
SOD1P00441 AP001160.3-201ENST00000601484 763 ntBASIC21.05■□□□□ 0.96
SOD1P00441 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SOD1P00441 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC21.05■□□□□ 0.96
SOD1P00441 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SOD1P00441 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SOD1P00441 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SOD1P00441 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
SOD1P00441 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC21.04■□□□□ 0.96
SOD1P00441 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SOD1P00441 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC21.04■□□□□ 0.96
SOD1P00441 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SOD1P00441 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SOD1P00441 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SOD1P00441 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SOD1P00441 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC21.04■□□□□ 0.96
SOD1P00441 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
SOD1P00441 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SOD1P00441 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SOD1P00441 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SOD1P00441 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
SOD1P00441 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SOD1P00441 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SOD1P00441 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
SOD1P00441 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
SOD1P00441 DLX3-202ENST00000512495 834 ntTSL 2 BASIC21.03■□□□□ 0.96
SOD1P00441 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
SOD1P00441 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SOD1P00441 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SOD1P00441 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SOD1P00441 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SOD1P00441 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SOD1P00441 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SOD1P00441 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SOD1P00441 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SOD1P00441 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SOD1P00441 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SOD1P00441 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
SOD1P00441 AC016769.1-201ENST00000409132 1010 ntBASIC21.02■□□□□ 0.96
SOD1P00441 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
SOD1P00441 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SOD1P00441 RNF146-206ENST00000480444 843 ntTSL 2 BASIC21.02■□□□□ 0.96
SOD1P00441 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
SOD1P00441 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.95
SOD1P00441 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.95
SOD1P00441 AC079834.2-201ENST00000609776 1949 ntBASIC21.02■□□□□ 0.95
SOD1P00441 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
SOD1P00441 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SOD1P00441 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SOD1P00441 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
SOD1P00441 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
SOD1P00441 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SOD1P00441 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC21.01■□□□□ 0.95
SOD1P00441 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
SOD1P00441 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC21.01■□□□□ 0.95
SOD1P00441 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SOD1P00441 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC21■□□□□ 0.95
SOD1P00441 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
SOD1P00441 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SOD1P00441 NAA20-201ENST00000310450 920 ntTSL 2 BASIC21■□□□□ 0.95
SOD1P00441 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC21■□□□□ 0.95
SOD1P00441 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC21■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms