Protein–RNA interactions for Protein: O76070

SNCG, Gamma-synuclein, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCGO76070 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SNCGO76070 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SNCGO76070 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SNCGO76070 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
SNCGO76070 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SNCGO76070 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
SNCGO76070 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SNCGO76070 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SNCGO76070 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SNCGO76070 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SNCGO76070 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC14.36□□□□□ -0.11
SNCGO76070 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
SNCGO76070 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SNCGO76070 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SNCGO76070 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SNCGO76070 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
SNCGO76070 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SNCGO76070 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SNCGO76070 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC14.36□□□□□ -0.11
SNCGO76070 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
SNCGO76070 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
SNCGO76070 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
SNCGO76070 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
SNCGO76070 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC14.35□□□□□ -0.11
SNCGO76070 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SNCGO76070 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC14.35□□□□□ -0.11
SNCGO76070 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SNCGO76070 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SNCGO76070 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SNCGO76070 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SNCGO76070 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SNCGO76070 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
SNCGO76070 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SNCGO76070 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC14.35□□□□□ -0.11
SNCGO76070 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SNCGO76070 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC14.35□□□□□ -0.11
SNCGO76070 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SNCGO76070 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SNCGO76070 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SNCGO76070 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SNCGO76070 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SNCGO76070 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
SNCGO76070 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC14.35□□□□□ -0.11
SNCGO76070 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SNCGO76070 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SNCGO76070 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SNCGO76070 C11orf96-202ENST00000528572 1834 ntBASIC14.34□□□□□ -0.11
SNCGO76070 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
SNCGO76070 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC14.34□□□□□ -0.11
SNCGO76070 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
SNCGO76070 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC14.34□□□□□ -0.11
SNCGO76070 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
SNCGO76070 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SNCGO76070 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SNCGO76070 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC14.34□□□□□ -0.11
SNCGO76070 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SNCGO76070 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
SNCGO76070 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SNCGO76070 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
SNCGO76070 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
SNCGO76070 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC14.33□□□□□ -0.11
SNCGO76070 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.11
SNCGO76070 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC14.33□□□□□ -0.11
SNCGO76070 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC14.33□□□□□ -0.11
SNCGO76070 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC14.33□□□□□ -0.11
SNCGO76070 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
SNCGO76070 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
SNCGO76070 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
SNCGO76070 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SNCGO76070 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SNCGO76070 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC14.33□□□□□ -0.12
SNCGO76070 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SNCGO76070 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SNCGO76070 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
SNCGO76070 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
SNCGO76070 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SNCGO76070 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
SNCGO76070 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
SNCGO76070 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
SNCGO76070 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SNCGO76070 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SNCGO76070 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SNCGO76070 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SNCGO76070 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC14.32□□□□□ -0.12
SNCGO76070 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC14.32□□□□□ -0.12
SNCGO76070 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SNCGO76070 AL157384.1-201ENST00000445995 2473 ntBASIC14.32□□□□□ -0.12
SNCGO76070 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC14.32□□□□□ -0.12
SNCGO76070 CHST11-202ENST00000546689 756 ntTSL 2 BASIC14.32□□□□□ -0.12
SNCGO76070 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SNCGO76070 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SNCGO76070 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SNCGO76070 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC14.32□□□□□ -0.12
SNCGO76070 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SNCGO76070 GCA-201ENST00000233612 1694 ntTSL 2 BASIC14.32□□□□□ -0.12
SNCGO76070 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SNCGO76070 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
SNCGO76070 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SNCGO76070 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC14.32□□□□□ -0.12
SNCGO76070 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms