Protein–RNA interactions for Protein: O75437

ZNF254, Zinc finger protein 254, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF254O75437 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ZNF254O75437 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC18.79■□□□□ 0.6
ZNF254O75437 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC18.79■□□□□ 0.6
ZNF254O75437 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC18.79■□□□□ 0.6
ZNF254O75437 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ZNF254O75437 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
ZNF254O75437 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
ZNF254O75437 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
ZNF254O75437 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
ZNF254O75437 SYT6-210ENST00000641643 1587 ntBASIC18.78■□□□□ 0.6
ZNF254O75437 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ZNF254O75437 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ZNF254O75437 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC18.78■□□□□ 0.6
ZNF254O75437 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC18.78■□□□□ 0.6
ZNF254O75437 AP005435.1-201ENST00000529293 1178 ntBASIC18.78■□□□□ 0.6
ZNF254O75437 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC18.78■□□□□ 0.6
ZNF254O75437 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
ZNF254O75437 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
ZNF254O75437 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC18.78■□□□□ 0.6
ZNF254O75437 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ZNF254O75437 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
ZNF254O75437 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ZNF254O75437 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
ZNF254O75437 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
ZNF254O75437 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
ZNF254O75437 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
ZNF254O75437 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ZNF254O75437 AC026471.6-201ENST00000622954 1905 ntBASIC18.77■□□□□ 0.6
ZNF254O75437 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ZNF254O75437 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ZNF254O75437 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC18.77■□□□□ 0.6
ZNF254O75437 RPP21-222ENST00000433076 577 ntTSL 2 BASIC18.77■□□□□ 0.6
ZNF254O75437 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC18.77■□□□□ 0.6
ZNF254O75437 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC18.77■□□□□ 0.6
ZNF254O75437 AC010525.1-201ENST00000585559 441 ntBASIC18.77■□□□□ 0.6
ZNF254O75437 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC18.77■□□□□ 0.6
ZNF254O75437 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC18.77■□□□□ 0.6
ZNF254O75437 SF1-220ENST00000626028 704 ntTSL 2 BASIC18.77■□□□□ 0.6
ZNF254O75437 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
ZNF254O75437 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC18.77■□□□□ 0.6
ZNF254O75437 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
ZNF254O75437 MFF-203ENST00000349901 1716 ntTSL 2 BASIC18.77■□□□□ 0.59
ZNF254O75437 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC18.77■□□□□ 0.59
ZNF254O75437 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
ZNF254O75437 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ZNF254O75437 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
ZNF254O75437 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
ZNF254O75437 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ZNF254O75437 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC18.76■□□□□ 0.59
ZNF254O75437 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
ZNF254O75437 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ZNF254O75437 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ZNF254O75437 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC18.76■□□□□ 0.59
ZNF254O75437 AC011298.3-201ENST00000615796 283 ntBASIC18.76■□□□□ 0.59
ZNF254O75437 AC136469.2-201ENST00000623944 1028 ntBASIC18.76■□□□□ 0.59
ZNF254O75437 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC18.76■□□□□ 0.59
ZNF254O75437 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
ZNF254O75437 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
ZNF254O75437 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ZNF254O75437 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ZNF254O75437 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
ZNF254O75437 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
ZNF254O75437 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
ZNF254O75437 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
ZNF254O75437 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ZNF254O75437 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ZNF254O75437 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ZNF254O75437 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
ZNF254O75437 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
ZNF254O75437 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ZNF254O75437 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC18.75■□□□□ 0.59
ZNF254O75437 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
ZNF254O75437 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ZNF254O75437 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
ZNF254O75437 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
ZNF254O75437 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ZNF254O75437 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ZNF254O75437 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
ZNF254O75437 SERBP1P1-201ENST00000396021 1160 ntBASIC18.75■□□□□ 0.59
ZNF254O75437 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC18.75■□□□□ 0.59
ZNF254O75437 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC18.75■□□□□ 0.59
ZNF254O75437 AL356441.2-201ENST00000443009 864 ntBASIC18.75■□□□□ 0.59
ZNF254O75437 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC18.75■□□□□ 0.59
ZNF254O75437 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
ZNF254O75437 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
ZNF254O75437 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
ZNF254O75437 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
ZNF254O75437 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ZNF254O75437 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC18.75■□□□□ 0.59
ZNF254O75437 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC18.75■□□□□ 0.59
ZNF254O75437 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ZNF254O75437 AL391422.3-201ENST00000603791 2761 ntBASIC18.75■□□□□ 0.59
ZNF254O75437 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ZNF254O75437 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
ZNF254O75437 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
ZNF254O75437 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
ZNF254O75437 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
ZNF254O75437 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
ZNF254O75437 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
ZNF254O75437 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms