Protein–RNA interactions for Protein: O60637

TSPAN3, Tetraspanin-3, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3O60637 WWOX-218ENST00000627394 894 ntTSL 5 BASIC21.95■■□□□ 1.1
TSPAN3O60637 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
TSPAN3O60637 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC21.95■■□□□ 1.1
TSPAN3O60637 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC21.95■■□□□ 1.1
TSPAN3O60637 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
TSPAN3O60637 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
TSPAN3O60637 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC21.94■■□□□ 1.1
TSPAN3O60637 AC026471.6-201ENST00000622954 1905 ntBASIC21.94■■□□□ 1.1
TSPAN3O60637 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
TSPAN3O60637 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
TSPAN3O60637 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
TSPAN3O60637 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
TSPAN3O60637 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
TSPAN3O60637 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC21.94■■□□□ 1.1
TSPAN3O60637 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
TSPAN3O60637 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
TSPAN3O60637 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
TSPAN3O60637 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
TSPAN3O60637 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
TSPAN3O60637 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
TSPAN3O60637 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
TSPAN3O60637 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
TSPAN3O60637 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
TSPAN3O60637 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
TSPAN3O60637 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
TSPAN3O60637 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
TSPAN3O60637 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC21.93■■□□□ 1.1
TSPAN3O60637 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
TSPAN3O60637 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC21.93■■□□□ 1.1
TSPAN3O60637 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC21.93■■□□□ 1.1
TSPAN3O60637 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC21.93■■□□□ 1.1
TSPAN3O60637 UBE2DNL-204ENST00000602536 740 ntBASIC21.93■■□□□ 1.1
TSPAN3O60637 AC011767.1-201ENST00000617410 1153 ntBASIC21.93■■□□□ 1.1
TSPAN3O60637 BID-214ENST00000617586 542 ntTSL 5 BASIC21.93■■□□□ 1.1
TSPAN3O60637 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
TSPAN3O60637 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC21.93■■□□□ 1.1
TSPAN3O60637 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
TSPAN3O60637 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
TSPAN3O60637 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC21.92■■□□□ 1.1
TSPAN3O60637 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
TSPAN3O60637 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
TSPAN3O60637 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC21.92■■□□□ 1.1
TSPAN3O60637 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
TSPAN3O60637 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
TSPAN3O60637 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
TSPAN3O60637 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC21.92■■□□□ 1.1
TSPAN3O60637 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC21.92■■□□□ 1.1
TSPAN3O60637 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC21.92■■□□□ 1.1
TSPAN3O60637 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
TSPAN3O60637 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
TSPAN3O60637 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC21.92■■□□□ 1.1
TSPAN3O60637 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
TSPAN3O60637 GUSBP5-202ENST00000510805 1989 ntBASIC21.92■■□□□ 1.1
TSPAN3O60637 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
TSPAN3O60637 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
TSPAN3O60637 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
TSPAN3O60637 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
TSPAN3O60637 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
TSPAN3O60637 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
TSPAN3O60637 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
TSPAN3O60637 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC21.91■■□□□ 1.1
TSPAN3O60637 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
TSPAN3O60637 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC21.91■■□□□ 1.1
TSPAN3O60637 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC21.91■■□□□ 1.1
TSPAN3O60637 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC21.91■■□□□ 1.1
TSPAN3O60637 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC21.91■■□□□ 1.1
TSPAN3O60637 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
TSPAN3O60637 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
TSPAN3O60637 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
TSPAN3O60637 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
TSPAN3O60637 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
TSPAN3O60637 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC21.9■■□□□ 1.1
TSPAN3O60637 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC21.9■■□□□ 1.1
TSPAN3O60637 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
TSPAN3O60637 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
TSPAN3O60637 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC21.9■■□□□ 1.1
TSPAN3O60637 EEF1DP3-203ENST00000566025 782 ntBASIC21.9■■□□□ 1.1
TSPAN3O60637 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
TSPAN3O60637 AC073111.5-205ENST00000641717 521 ntBASIC21.9■■□□□ 1.1
TSPAN3O60637 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC21.9■■□□□ 1.1
TSPAN3O60637 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC21.9■■□□□ 1.1
TSPAN3O60637 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
TSPAN3O60637 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
TSPAN3O60637 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC21.89■■□□□ 1.1
TSPAN3O60637 AC003102.1-202ENST00000563394 1796 ntBASIC21.89■■□□□ 1.1
TSPAN3O60637 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
TSPAN3O60637 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC21.89■■□□□ 1.1
TSPAN3O60637 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
TSPAN3O60637 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.09
TSPAN3O60637 PARP1-202ENST00000366792 553 ntTSL 3 BASIC21.89■■□□□ 1.09
TSPAN3O60637 AC010141.2-201ENST00000452426 721 ntBASIC21.89■■□□□ 1.09
TSPAN3O60637 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC21.89■■□□□ 1.09
TSPAN3O60637 AC138907.5-202ENST00000569484 235 ntBASIC21.89■■□□□ 1.09
TSPAN3O60637 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
TSPAN3O60637 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
TSPAN3O60637 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
TSPAN3O60637 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
TSPAN3O60637 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC21.88■■□□□ 1.09
TSPAN3O60637 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC21.88■■□□□ 1.09
TSPAN3O60637 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms