Protein–RNA interactions for Protein: A6NKQ9

CGB1, Choriogonadotropin subunit beta variant 1, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGB1A6NKQ9 AC024257.2-201ENST00000549699 147 ntBASIC16.99■□□□□ 0.31
CGB1A6NKQ9 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
CGB1A6NKQ9 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC16.99■□□□□ 0.31
CGB1A6NKQ9 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC16.99■□□□□ 0.31
CGB1A6NKQ9 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CGB1A6NKQ9 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC16.99■□□□□ 0.31
CGB1A6NKQ9 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CGB1A6NKQ9 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
CGB1A6NKQ9 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CGB1A6NKQ9 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CGB1A6NKQ9 AP004607.7-201ENST00000527152 1677 ntBASIC16.98■□□□□ 0.31
CGB1A6NKQ9 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC16.98■□□□□ 0.31
CGB1A6NKQ9 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CGB1A6NKQ9 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC16.98■□□□□ 0.31
CGB1A6NKQ9 AC133561.4-201ENST00000566112 224 ntBASIC16.98■□□□□ 0.31
CGB1A6NKQ9 AL136162.1-201ENST00000607711 1078 ntBASIC16.98■□□□□ 0.31
CGB1A6NKQ9 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC16.98■□□□□ 0.31
CGB1A6NKQ9 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC16.98■□□□□ 0.31
CGB1A6NKQ9 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC16.98■□□□□ 0.31
CGB1A6NKQ9 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CGB1A6NKQ9 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CGB1A6NKQ9 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CGB1A6NKQ9 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CGB1A6NKQ9 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CGB1A6NKQ9 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
CGB1A6NKQ9 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CGB1A6NKQ9 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
CGB1A6NKQ9 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC16.98■□□□□ 0.31
CGB1A6NKQ9 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CGB1A6NKQ9 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CGB1A6NKQ9 MFF-203ENST00000349901 1716 ntTSL 2 BASIC16.97■□□□□ 0.31
CGB1A6NKQ9 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
CGB1A6NKQ9 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CGB1A6NKQ9 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CGB1A6NKQ9 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CGB1A6NKQ9 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC16.97■□□□□ 0.31
CGB1A6NKQ9 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CGB1A6NKQ9 AF106564.1-201ENST00000607058 2553 ntBASIC16.97■□□□□ 0.31
CGB1A6NKQ9 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CGB1A6NKQ9 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CGB1A6NKQ9 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC16.97■□□□□ 0.31
CGB1A6NKQ9 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CGB1A6NKQ9 FEM1AP4-201ENST00000443167 1987 ntBASIC16.97■□□□□ 0.31
CGB1A6NKQ9 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC16.97■□□□□ 0.31
CGB1A6NKQ9 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CGB1A6NKQ9 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC16.96■□□□□ 0.31
CGB1A6NKQ9 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC16.96■□□□□ 0.31
CGB1A6NKQ9 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC16.96■□□□□ 0.31
CGB1A6NKQ9 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
CGB1A6NKQ9 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CGB1A6NKQ9 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CGB1A6NKQ9 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
CGB1A6NKQ9 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC16.96■□□□□ 0.3
CGB1A6NKQ9 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
CGB1A6NKQ9 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC16.96■□□□□ 0.3
CGB1A6NKQ9 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.3
CGB1A6NKQ9 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC16.96■□□□□ 0.3
CGB1A6NKQ9 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
CGB1A6NKQ9 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CGB1A6NKQ9 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CGB1A6NKQ9 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC16.95■□□□□ 0.3
CGB1A6NKQ9 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CGB1A6NKQ9 AC003102.1-202ENST00000563394 1796 ntBASIC16.95■□□□□ 0.3
CGB1A6NKQ9 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
CGB1A6NKQ9 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CGB1A6NKQ9 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC16.95■□□□□ 0.3
CGB1A6NKQ9 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CGB1A6NKQ9 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CGB1A6NKQ9 AL034346.1-201ENST00000568244 1277 ntBASIC16.95■□□□□ 0.3
CGB1A6NKQ9 AC104564.3-201ENST00000582367 638 ntBASIC16.95■□□□□ 0.3
CGB1A6NKQ9 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CGB1A6NKQ9 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CGB1A6NKQ9 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC16.95■□□□□ 0.3
CGB1A6NKQ9 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CGB1A6NKQ9 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CGB1A6NKQ9 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CGB1A6NKQ9 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
CGB1A6NKQ9 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC16.94■□□□□ 0.3
CGB1A6NKQ9 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CGB1A6NKQ9 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CGB1A6NKQ9 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CGB1A6NKQ9 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
CGB1A6NKQ9 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC16.94■□□□□ 0.3
CGB1A6NKQ9 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CGB1A6NKQ9 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
CGB1A6NKQ9 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC16.94■□□□□ 0.3
CGB1A6NKQ9 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC16.94■□□□□ 0.3
CGB1A6NKQ9 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC16.94■□□□□ 0.3
CGB1A6NKQ9 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC16.94■□□□□ 0.3
CGB1A6NKQ9 SMUG1P1-201ENST00000590640 811 ntBASIC16.94■□□□□ 0.3
CGB1A6NKQ9 AC233992.3-201ENST00000607491 485 ntBASIC16.94■□□□□ 0.3
CGB1A6NKQ9 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CGB1A6NKQ9 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CGB1A6NKQ9 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CGB1A6NKQ9 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CGB1A6NKQ9 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CGB1A6NKQ9 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC16.94■□□□□ 0.3
CGB1A6NKQ9 AC135279.3-201ENST00000610945 1311 ntBASIC16.94■□□□□ 0.3
CGB1A6NKQ9 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CGB1A6NKQ9 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms