Protein–RNA interactions for Protein: A6NCQ9

RNF222, RING finger protein 222, humanhuman

Predictions only

Length 220 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF222A6NCQ9 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
RNF222A6NCQ9 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RNF222A6NCQ9 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RNF222A6NCQ9 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RNF222A6NCQ9 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
RNF222A6NCQ9 EML3-217ENST00000531557 2509 ntTSL 5 BASIC17.34■□□□□ 0.37
RNF222A6NCQ9 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
RNF222A6NCQ9 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
RNF222A6NCQ9 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
RNF222A6NCQ9 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC17.33■□□□□ 0.37
RNF222A6NCQ9 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
RNF222A6NCQ9 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
RNF222A6NCQ9 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
RNF222A6NCQ9 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.37
RNF222A6NCQ9 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
RNF222A6NCQ9 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
RNF222A6NCQ9 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC17.33■□□□□ 0.37
RNF222A6NCQ9 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
RNF222A6NCQ9 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
RNF222A6NCQ9 FP325331.1-202ENST00000623531 1380 ntBASIC17.33■□□□□ 0.36
RNF222A6NCQ9 LONRF2P2-201ENST00000439212 571 ntBASIC17.33■□□□□ 0.36
RNF222A6NCQ9 AC018755.3-202ENST00000596210 929 ntBASIC17.33■□□□□ 0.36
RNF222A6NCQ9 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RNF222A6NCQ9 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RNF222A6NCQ9 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RNF222A6NCQ9 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
RNF222A6NCQ9 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
RNF222A6NCQ9 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
RNF222A6NCQ9 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
RNF222A6NCQ9 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
RNF222A6NCQ9 PARN-205ENST00000539279 1557 ntTSL 2 BASIC17.32■□□□□ 0.36
RNF222A6NCQ9 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RNF222A6NCQ9 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC17.32■□□□□ 0.36
RNF222A6NCQ9 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
RNF222A6NCQ9 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RNF222A6NCQ9 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC17.32■□□□□ 0.36
RNF222A6NCQ9 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
RNF222A6NCQ9 IDNK-203ENST00000405990 629 ntTSL 2 BASIC17.32■□□□□ 0.36
RNF222A6NCQ9 SPCS2P3-201ENST00000500401 656 ntBASIC17.32■□□□□ 0.36
RNF222A6NCQ9 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC17.32■□□□□ 0.36
RNF222A6NCQ9 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RNF222A6NCQ9 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
RNF222A6NCQ9 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RNF222A6NCQ9 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC17.32■□□□□ 0.36
RNF222A6NCQ9 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RNF222A6NCQ9 AC006128.1-201ENST00000624704 1661 ntBASIC17.32■□□□□ 0.36
RNF222A6NCQ9 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RNF222A6NCQ9 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RNF222A6NCQ9 AF131216.4-201ENST00000638924 1588 ntBASIC17.32■□□□□ 0.36
RNF222A6NCQ9 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
RNF222A6NCQ9 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
RNF222A6NCQ9 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RNF222A6NCQ9 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC17.31■□□□□ 0.36
RNF222A6NCQ9 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC17.31■□□□□ 0.36
RNF222A6NCQ9 AC098818.2-201ENST00000564925 2320 ntBASIC17.31■□□□□ 0.36
RNF222A6NCQ9 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RNF222A6NCQ9 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RNF222A6NCQ9 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RNF222A6NCQ9 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
RNF222A6NCQ9 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
RNF222A6NCQ9 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RNF222A6NCQ9 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC17.31■□□□□ 0.36
RNF222A6NCQ9 AC133552.2-201ENST00000619106 1032 ntBASIC17.31■□□□□ 0.36
RNF222A6NCQ9 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RNF222A6NCQ9 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC17.31■□□□□ 0.36
RNF222A6NCQ9 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RNF222A6NCQ9 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RNF222A6NCQ9 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RNF222A6NCQ9 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
RNF222A6NCQ9 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RNF222A6NCQ9 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
RNF222A6NCQ9 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
RNF222A6NCQ9 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RNF222A6NCQ9 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
RNF222A6NCQ9 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
RNF222A6NCQ9 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
RNF222A6NCQ9 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
RNF222A6NCQ9 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RNF222A6NCQ9 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RNF222A6NCQ9 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RNF222A6NCQ9 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
RNF222A6NCQ9 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC17.3■□□□□ 0.36
RNF222A6NCQ9 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RNF222A6NCQ9 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC17.3■□□□□ 0.36
RNF222A6NCQ9 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
RNF222A6NCQ9 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
RNF222A6NCQ9 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RNF222A6NCQ9 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RNF222A6NCQ9 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RNF222A6NCQ9 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RNF222A6NCQ9 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RNF222A6NCQ9 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RNF222A6NCQ9 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
RNF222A6NCQ9 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC17.29■□□□□ 0.36
RNF222A6NCQ9 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
RNF222A6NCQ9 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RNF222A6NCQ9 AC004687.1-201ENST00000579003 1625 ntBASIC17.29■□□□□ 0.36
RNF222A6NCQ9 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RNF222A6NCQ9 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RNF222A6NCQ9 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms