Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC19.95■□□□□ 0.78
TCRBV3S1A0A5B6 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TCRBV3S1A0A5B6 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TCRBV3S1A0A5B6 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC19.95■□□□□ 0.78
TCRBV3S1A0A5B6 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC19.95■□□□□ 0.78
TCRBV3S1A0A5B6 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
TCRBV3S1A0A5B6 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC19.95■□□□□ 0.78
TCRBV3S1A0A5B6 AC006128.1-201ENST00000624704 1661 ntBASIC19.95■□□□□ 0.78
TCRBV3S1A0A5B6 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
TCRBV3S1A0A5B6 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC19.95■□□□□ 0.78
TCRBV3S1A0A5B6 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC19.95■□□□□ 0.78
TCRBV3S1A0A5B6 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
TCRBV3S1A0A5B6 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC19.95■□□□□ 0.78
TCRBV3S1A0A5B6 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
TCRBV3S1A0A5B6 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC19.95■□□□□ 0.78
TCRBV3S1A0A5B6 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TCRBV3S1A0A5B6 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
TCRBV3S1A0A5B6 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
TCRBV3S1A0A5B6 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TCRBV3S1A0A5B6 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
TCRBV3S1A0A5B6 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TCRBV3S1A0A5B6 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
TCRBV3S1A0A5B6 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
TCRBV3S1A0A5B6 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TCRBV3S1A0A5B6 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TCRBV3S1A0A5B6 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TCRBV3S1A0A5B6 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC19.94■□□□□ 0.78
TCRBV3S1A0A5B6 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
TCRBV3S1A0A5B6 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
TCRBV3S1A0A5B6 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TCRBV3S1A0A5B6 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
TCRBV3S1A0A5B6 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC19.94■□□□□ 0.78
TCRBV3S1A0A5B6 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
TCRBV3S1A0A5B6 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
TCRBV3S1A0A5B6 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TCRBV3S1A0A5B6 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC19.94■□□□□ 0.78
TCRBV3S1A0A5B6 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
TCRBV3S1A0A5B6 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC19.93■□□□□ 0.78
TCRBV3S1A0A5B6 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
TCRBV3S1A0A5B6 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TCRBV3S1A0A5B6 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
TCRBV3S1A0A5B6 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
TCRBV3S1A0A5B6 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
TCRBV3S1A0A5B6 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC19.93■□□□□ 0.78
TCRBV3S1A0A5B6 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
TCRBV3S1A0A5B6 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TCRBV3S1A0A5B6 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
TCRBV3S1A0A5B6 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
TCRBV3S1A0A5B6 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TCRBV3S1A0A5B6 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC19.93■□□□□ 0.78
TCRBV3S1A0A5B6 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TCRBV3S1A0A5B6 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC19.93■□□□□ 0.78
TCRBV3S1A0A5B6 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC19.92■□□□□ 0.78
TCRBV3S1A0A5B6 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TCRBV3S1A0A5B6 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TCRBV3S1A0A5B6 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TCRBV3S1A0A5B6 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC19.92■□□□□ 0.78
TCRBV3S1A0A5B6 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TCRBV3S1A0A5B6 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC19.92■□□□□ 0.78
TCRBV3S1A0A5B6 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC19.92■□□□□ 0.78
TCRBV3S1A0A5B6 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC19.92■□□□□ 0.78
TCRBV3S1A0A5B6 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TCRBV3S1A0A5B6 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TCRBV3S1A0A5B6 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
TCRBV3S1A0A5B6 AFG3L1P-217ENST00000557444 2447 ntBASIC19.92■□□□□ 0.78
TCRBV3S1A0A5B6 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
TCRBV3S1A0A5B6 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
TCRBV3S1A0A5B6 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
TCRBV3S1A0A5B6 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC19.91■□□□□ 0.78
TCRBV3S1A0A5B6 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TCRBV3S1A0A5B6 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TCRBV3S1A0A5B6 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC19.91■□□□□ 0.78
TCRBV3S1A0A5B6 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC19.91■□□□□ 0.78
TCRBV3S1A0A5B6 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TCRBV3S1A0A5B6 AC004987.1-201ENST00000428627 508 ntBASIC19.91■□□□□ 0.78
TCRBV3S1A0A5B6 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC19.91■□□□□ 0.78
TCRBV3S1A0A5B6 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TCRBV3S1A0A5B6 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
TCRBV3S1A0A5B6 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC19.91■□□□□ 0.78
TCRBV3S1A0A5B6 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TCRBV3S1A0A5B6 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
TCRBV3S1A0A5B6 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TCRBV3S1A0A5B6 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC19.91■□□□□ 0.78
TCRBV3S1A0A5B6 ME2-218ENST00000640965 2476 ntTSL 5 BASIC19.91■□□□□ 0.78
TCRBV3S1A0A5B6 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TCRBV3S1A0A5B6 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
TCRBV3S1A0A5B6 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC19.9■□□□□ 0.78
TCRBV3S1A0A5B6 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
TCRBV3S1A0A5B6 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TCRBV3S1A0A5B6 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC19.9■□□□□ 0.78
TCRBV3S1A0A5B6 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
TCRBV3S1A0A5B6 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC19.9■□□□□ 0.78
TCRBV3S1A0A5B6 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC19.9■□□□□ 0.78
TCRBV3S1A0A5B6 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TCRBV3S1A0A5B6 ATP5G2P3-201ENST00000429083 425 ntBASIC19.9■□□□□ 0.78
TCRBV3S1A0A5B6 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC19.9■□□□□ 0.78
TCRBV3S1A0A5B6 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
TCRBV3S1A0A5B6 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TCRBV3S1A0A5B6 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TCRBV3S1A0A5B6 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms