Protein–RNA interactions for Protein: A0A0K0K1C4

TRBV27, T-cell receptor beta variable 27 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV27A0A0K0K1C4 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRBV27A0A0K0K1C4 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC15.04■□□□□ -0
TRBV27A0A0K0K1C4 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
TRBV27A0A0K0K1C4 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC15.03■□□□□ -0
TRBV27A0A0K0K1C4 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRBV27A0A0K0K1C4 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC15.03■□□□□ -0
TRBV27A0A0K0K1C4 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC15.03■□□□□ -0
TRBV27A0A0K0K1C4 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC15.03■□□□□ -0
TRBV27A0A0K0K1C4 GTSE1-AS1-202ENST00000623117 1518 ntBASIC15.03■□□□□ -0
TRBV27A0A0K0K1C4 AC133637.1-201ENST00000624115 1537 ntBASIC15.03■□□□□ -0
TRBV27A0A0K0K1C4 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRBV27A0A0K0K1C4 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC15.03■□□□□ -0
TRBV27A0A0K0K1C4 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRBV27A0A0K0K1C4 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC15.03■□□□□ -0
TRBV27A0A0K0K1C4 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRBV27A0A0K0K1C4 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
TRBV27A0A0K0K1C4 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
TRBV27A0A0K0K1C4 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRBV27A0A0K0K1C4 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
TRBV27A0A0K0K1C4 ADM-207ENST00000530439 1839 ntTSL 2 BASIC15.03■□□□□ -0
TRBV27A0A0K0K1C4 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC15.03■□□□□ -0
TRBV27A0A0K0K1C4 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRBV27A0A0K0K1C4 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRBV27A0A0K0K1C4 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TRBV27A0A0K0K1C4 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
TRBV27A0A0K0K1C4 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC15.02■□□□□ -0
TRBV27A0A0K0K1C4 STX4-202ENST00000394998 1498 ntTSL 2 BASIC15.02■□□□□ -0
TRBV27A0A0K0K1C4 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC15.02■□□□□ -0
TRBV27A0A0K0K1C4 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TRBV27A0A0K0K1C4 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC15.02■□□□□ -0
TRBV27A0A0K0K1C4 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC15.02■□□□□ -0
TRBV27A0A0K0K1C4 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
TRBV27A0A0K0K1C4 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TRBV27A0A0K0K1C4 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TRBV27A0A0K0K1C4 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC15.02■□□□□ -0
TRBV27A0A0K0K1C4 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TRBV27A0A0K0K1C4 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
TRBV27A0A0K0K1C4 HES6-204ENST00000409182 863 ntTSL 2 BASIC15.02■□□□□ -0
TRBV27A0A0K0K1C4 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC15.02■□□□□ -0
TRBV27A0A0K0K1C4 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TRBV27A0A0K0K1C4 AL034346.1-201ENST00000568244 1277 ntBASIC15.02■□□□□ -0
TRBV27A0A0K0K1C4 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC15.02■□□□□ -0
TRBV27A0A0K0K1C4 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TRBV27A0A0K0K1C4 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
TRBV27A0A0K0K1C4 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
TRBV27A0A0K0K1C4 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TRBV27A0A0K0K1C4 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC15.02□□□□□ -0.01
TRBV27A0A0K0K1C4 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC15.02□□□□□ -0.01
TRBV27A0A0K0K1C4 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TRBV27A0A0K0K1C4 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
TRBV27A0A0K0K1C4 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
TRBV27A0A0K0K1C4 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC15.02□□□□□ -0.01
TRBV27A0A0K0K1C4 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TRBV27A0A0K0K1C4 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
TRBV27A0A0K0K1C4 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRBV27A0A0K0K1C4 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC15.01□□□□□ -0.01
TRBV27A0A0K0K1C4 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRBV27A0A0K0K1C4 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRBV27A0A0K0K1C4 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC15.01□□□□□ -0.01
TRBV27A0A0K0K1C4 KRT125P-201ENST00000546827 989 ntBASIC15.01□□□□□ -0.01
TRBV27A0A0K0K1C4 AL451085.2-201ENST00000605085 799 ntBASIC15.01□□□□□ -0.01
TRBV27A0A0K0K1C4 AC087239.1-201ENST00000622671 572 ntBASIC15.01□□□□□ -0.01
TRBV27A0A0K0K1C4 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC15.01□□□□□ -0.01
TRBV27A0A0K0K1C4 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC15.01□□□□□ -0.01
TRBV27A0A0K0K1C4 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC15.01□□□□□ -0.01
TRBV27A0A0K0K1C4 GABARAPL3-202ENST00000624044 1851 ntBASIC15.01□□□□□ -0.01
TRBV27A0A0K0K1C4 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRBV27A0A0K0K1C4 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRBV27A0A0K0K1C4 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC15.01□□□□□ -0.01
TRBV27A0A0K0K1C4 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRBV27A0A0K0K1C4 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TRBV27A0A0K0K1C4 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
TRBV27A0A0K0K1C4 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TRBV27A0A0K0K1C4 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
TRBV27A0A0K0K1C4 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TRBV27A0A0K0K1C4 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
TRBV27A0A0K0K1C4 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
TRBV27A0A0K0K1C4 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC15□□□□□ -0.01
TRBV27A0A0K0K1C4 RBM38-205ENST00000440234 686 ntTSL 2 BASIC15□□□□□ -0.01
TRBV27A0A0K0K1C4 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC15□□□□□ -0.01
TRBV27A0A0K0K1C4 Z92544.1-202ENST00000571933 1220 ntBASIC15□□□□□ -0.01
TRBV27A0A0K0K1C4 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC15□□□□□ -0.01
TRBV27A0A0K0K1C4 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC15□□□□□ -0.01
TRBV27A0A0K0K1C4 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TRBV27A0A0K0K1C4 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC15□□□□□ -0.01
TRBV27A0A0K0K1C4 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TRBV27A0A0K0K1C4 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
TRBV27A0A0K0K1C4 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TRBV27A0A0K0K1C4 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TRBV27A0A0K0K1C4 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
TRBV27A0A0K0K1C4 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
TRBV27A0A0K0K1C4 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
TRBV27A0A0K0K1C4 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRBV27A0A0K0K1C4 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC14.99□□□□□ -0.01
TRBV27A0A0K0K1C4 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRBV27A0A0K0K1C4 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRBV27A0A0K0K1C4 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRBV27A0A0K0K1C4 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRBV27A0A0K0K1C4 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC14.99□□□□□ -0.01
TRBV27A0A0K0K1C4 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms