Protein–RNA interactions for Protein: A0A075B6U4

TRAV7, T-cell receptor alpha variable 7 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV7A0A075B6U4 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
TRAV7A0A075B6U4 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TRAV7A0A075B6U4 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
TRAV7A0A075B6U4 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TRAV7A0A075B6U4 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
TRAV7A0A075B6U4 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TRAV7A0A075B6U4 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
TRAV7A0A075B6U4 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
TRAV7A0A075B6U4 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
TRAV7A0A075B6U4 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC12.63□□□□□ -0.39
TRAV7A0A075B6U4 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
TRAV7A0A075B6U4 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TRAV7A0A075B6U4 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TRAV7A0A075B6U4 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
TRAV7A0A075B6U4 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
TRAV7A0A075B6U4 PCDHAC2-203ENST00000615316 3011 ntBASIC12.63□□□□□ -0.39
TRAV7A0A075B6U4 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
TRAV7A0A075B6U4 AP000974.1-201ENST00000623909 2387 ntBASIC12.63□□□□□ -0.39
TRAV7A0A075B6U4 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TRAV7A0A075B6U4 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC12.63□□□□□ -0.39
TRAV7A0A075B6U4 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TRAV7A0A075B6U4 GOLGA2P6-201ENST00000340929 2049 ntBASIC12.63□□□□□ -0.39
TRAV7A0A075B6U4 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TRAV7A0A075B6U4 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TRAV7A0A075B6U4 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TRAV7A0A075B6U4 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TRAV7A0A075B6U4 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
TRAV7A0A075B6U4 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TRAV7A0A075B6U4 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TRAV7A0A075B6U4 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
TRAV7A0A075B6U4 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC12.63□□□□□ -0.39
TRAV7A0A075B6U4 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC12.63□□□□□ -0.39
TRAV7A0A075B6U4 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
TRAV7A0A075B6U4 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TRAV7A0A075B6U4 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
TRAV7A0A075B6U4 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC12.62□□□□□ -0.39
TRAV7A0A075B6U4 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC12.62□□□□□ -0.39
TRAV7A0A075B6U4 BID-204ENST00000399767 2129 ntTSL 2 BASIC12.62□□□□□ -0.39
TRAV7A0A075B6U4 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TRAV7A0A075B6U4 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC12.62□□□□□ -0.39
TRAV7A0A075B6U4 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
TRAV7A0A075B6U4 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC12.62□□□□□ -0.39
TRAV7A0A075B6U4 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TRAV7A0A075B6U4 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC12.62□□□□□ -0.39
TRAV7A0A075B6U4 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
TRAV7A0A075B6U4 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TRAV7A0A075B6U4 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
TRAV7A0A075B6U4 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TRAV7A0A075B6U4 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
TRAV7A0A075B6U4 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TRAV7A0A075B6U4 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TRAV7A0A075B6U4 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
TRAV7A0A075B6U4 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
TRAV7A0A075B6U4 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TRAV7A0A075B6U4 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TRAV7A0A075B6U4 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
TRAV7A0A075B6U4 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TRAV7A0A075B6U4 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
TRAV7A0A075B6U4 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TRAV7A0A075B6U4 NOC2LP1-202ENST00000452600 2235 ntBASIC12.61□□□□□ -0.39
TRAV7A0A075B6U4 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
TRAV7A0A075B6U4 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
TRAV7A0A075B6U4 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC12.61□□□□□ -0.39
TRAV7A0A075B6U4 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
TRAV7A0A075B6U4 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
TRAV7A0A075B6U4 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TRAV7A0A075B6U4 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC12.61□□□□□ -0.39
TRAV7A0A075B6U4 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC12.61□□□□□ -0.39
TRAV7A0A075B6U4 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC12.61□□□□□ -0.39
TRAV7A0A075B6U4 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
TRAV7A0A075B6U4 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TRAV7A0A075B6U4 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
TRAV7A0A075B6U4 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
TRAV7A0A075B6U4 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TRAV7A0A075B6U4 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TRAV7A0A075B6U4 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TRAV7A0A075B6U4 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
TRAV7A0A075B6U4 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC12.6□□□□□ -0.39
TRAV7A0A075B6U4 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC12.6□□□□□ -0.39
TRAV7A0A075B6U4 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
TRAV7A0A075B6U4 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC12.6□□□□□ -0.39
TRAV7A0A075B6U4 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
TRAV7A0A075B6U4 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
TRAV7A0A075B6U4 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC12.6□□□□□ -0.39
TRAV7A0A075B6U4 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TRAV7A0A075B6U4 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TRAV7A0A075B6U4 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TRAV7A0A075B6U4 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TRAV7A0A075B6U4 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TRAV7A0A075B6U4 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC12.6□□□□□ -0.39
TRAV7A0A075B6U4 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
TRAV7A0A075B6U4 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
TRAV7A0A075B6U4 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TRAV7A0A075B6U4 DYNLL1-208ENST00000550178 581 ntBASIC12.6□□□□□ -0.39
TRAV7A0A075B6U4 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TRAV7A0A075B6U4 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC12.6□□□□□ -0.39
TRAV7A0A075B6U4 NEFHP1-201ENST00000412845 2629 ntBASIC12.6□□□□□ -0.39
TRAV7A0A075B6U4 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TRAV7A0A075B6U4 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
TRAV7A0A075B6U4 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms