Protein–RNA interactions for Protein: Q9UN70

PCDHGC3, Protocadherin gamma-C3, humanhuman

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3Q9UN70 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
PCDHGC3Q9UN70 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
PCDHGC3Q9UN70 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
PCDHGC3Q9UN70 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC22.59■■□□□ 1.21
PCDHGC3Q9UN70 MIR6084-201ENST00000622012 110 ntBASIC22.59■■□□□ 1.21
PCDHGC3Q9UN70 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC22.59■■□□□ 1.21
PCDHGC3Q9UN70 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
PCDHGC3Q9UN70 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC22.59■■□□□ 1.21
PCDHGC3Q9UN70 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC22.59■■□□□ 1.21
PCDHGC3Q9UN70 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
PCDHGC3Q9UN70 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC22.58■■□□□ 1.21
PCDHGC3Q9UN70 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.21
PCDHGC3Q9UN70 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC22.58■■□□□ 1.21
PCDHGC3Q9UN70 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC22.58■■□□□ 1.21
PCDHGC3Q9UN70 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
PCDHGC3Q9UN70 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC22.58■■□□□ 1.21
PCDHGC3Q9UN70 ZNRF2P3-201ENST00000424200 374 ntBASIC22.58■■□□□ 1.21
PCDHGC3Q9UN70 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
PCDHGC3Q9UN70 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC22.58■■□□□ 1.21
PCDHGC3Q9UN70 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC22.58■■□□□ 1.21
PCDHGC3Q9UN70 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
PCDHGC3Q9UN70 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC22.58■■□□□ 1.2
PCDHGC3Q9UN70 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
PCDHGC3Q9UN70 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC22.58■■□□□ 1.2
PCDHGC3Q9UN70 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC22.58■■□□□ 1.2
PCDHGC3Q9UN70 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC22.58■■□□□ 1.2
PCDHGC3Q9UN70 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
PCDHGC3Q9UN70 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
PCDHGC3Q9UN70 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
PCDHGC3Q9UN70 AK1-201ENST00000223836 736 ntTSL 3 BASIC22.57■■□□□ 1.2
PCDHGC3Q9UN70 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC22.57■■□□□ 1.2
PCDHGC3Q9UN70 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC22.57■■□□□ 1.2
PCDHGC3Q9UN70 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC22.57■■□□□ 1.2
PCDHGC3Q9UN70 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
PCDHGC3Q9UN70 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
PCDHGC3Q9UN70 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
PCDHGC3Q9UN70 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
PCDHGC3Q9UN70 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC22.56■■□□□ 1.2
PCDHGC3Q9UN70 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC22.56■■□□□ 1.2
PCDHGC3Q9UN70 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC22.56■■□□□ 1.2
PCDHGC3Q9UN70 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC22.56■■□□□ 1.2
PCDHGC3Q9UN70 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
PCDHGC3Q9UN70 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
PCDHGC3Q9UN70 JTB-203ENST00000368589 1216 ntTSL 2 BASIC22.56■■□□□ 1.2
PCDHGC3Q9UN70 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
PCDHGC3Q9UN70 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
PCDHGC3Q9UN70 CPT2-209ENST00000636935 803 ntTSL 5 BASIC22.56■■□□□ 1.2
PCDHGC3Q9UN70 MFF-203ENST00000349901 1716 ntTSL 2 BASIC22.56■■□□□ 1.2
PCDHGC3Q9UN70 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
PCDHGC3Q9UN70 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC22.56■■□□□ 1.2
PCDHGC3Q9UN70 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PCDHGC3Q9UN70 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PCDHGC3Q9UN70 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PCDHGC3Q9UN70 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PCDHGC3Q9UN70 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC22.55■■□□□ 1.2
PCDHGC3Q9UN70 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC22.55■■□□□ 1.2
PCDHGC3Q9UN70 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
PCDHGC3Q9UN70 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC22.55■■□□□ 1.2
PCDHGC3Q9UN70 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC22.55■■□□□ 1.2
PCDHGC3Q9UN70 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC22.55■■□□□ 1.2
PCDHGC3Q9UN70 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC22.55■■□□□ 1.2
PCDHGC3Q9UN70 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PCDHGC3Q9UN70 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PCDHGC3Q9UN70 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC22.54■■□□□ 1.2
PCDHGC3Q9UN70 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
PCDHGC3Q9UN70 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC22.54■■□□□ 1.2
PCDHGC3Q9UN70 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PCDHGC3Q9UN70 FXN-202ENST00000396364 980 ntTSL 5 BASIC22.54■■□□□ 1.2
PCDHGC3Q9UN70 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC22.54■■□□□ 1.2
PCDHGC3Q9UN70 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PCDHGC3Q9UN70 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PCDHGC3Q9UN70 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PCDHGC3Q9UN70 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC22.54■■□□□ 1.2
PCDHGC3Q9UN70 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PCDHGC3Q9UN70 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PCDHGC3Q9UN70 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
PCDHGC3Q9UN70 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
PCDHGC3Q9UN70 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
PCDHGC3Q9UN70 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
PCDHGC3Q9UN70 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
PCDHGC3Q9UN70 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
PCDHGC3Q9UN70 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC22.53■■□□□ 1.2
PCDHGC3Q9UN70 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
PCDHGC3Q9UN70 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC22.53■■□□□ 1.2
PCDHGC3Q9UN70 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
PCDHGC3Q9UN70 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC22.53■■□□□ 1.2
PCDHGC3Q9UN70 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC22.53■■□□□ 1.2
PCDHGC3Q9UN70 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
PCDHGC3Q9UN70 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
PCDHGC3Q9UN70 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC22.52■■□□□ 1.2
PCDHGC3Q9UN70 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
PCDHGC3Q9UN70 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC22.52■■□□□ 1.2
PCDHGC3Q9UN70 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
PCDHGC3Q9UN70 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
PCDHGC3Q9UN70 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
PCDHGC3Q9UN70 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC22.52■■□□□ 1.2
PCDHGC3Q9UN70 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC22.52■■□□□ 1.2
PCDHGC3Q9UN70 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
PCDHGC3Q9UN70 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
PCDHGC3Q9UN70 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC22.52■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms