Protein–RNA interactions for Protein: Q9NRR3

CDC42SE2, CDC42 small effector protein 2, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2Q9NRR3 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CDC42SE2Q9NRR3 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC14.68□□□□□ -0.06
CDC42SE2Q9NRR3 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CDC42SE2Q9NRR3 OXCT2P1-201ENST00000447263 1535 ntBASIC14.67□□□□□ -0.06
CDC42SE2Q9NRR3 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
CDC42SE2Q9NRR3 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
CDC42SE2Q9NRR3 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC14.67□□□□□ -0.06
CDC42SE2Q9NRR3 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
CDC42SE2Q9NRR3 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CDC42SE2Q9NRR3 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CDC42SE2Q9NRR3 AC010141.3-201ENST00000456659 717 ntBASIC14.67□□□□□ -0.06
CDC42SE2Q9NRR3 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC14.67□□□□□ -0.06
CDC42SE2Q9NRR3 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC14.67□□□□□ -0.06
CDC42SE2Q9NRR3 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC14.67□□□□□ -0.06
CDC42SE2Q9NRR3 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CDC42SE2Q9NRR3 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
CDC42SE2Q9NRR3 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
CDC42SE2Q9NRR3 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CDC42SE2Q9NRR3 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CDC42SE2Q9NRR3 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
CDC42SE2Q9NRR3 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDC42SE2Q9NRR3 GATM-206ENST00000558336 1522 ntTSL 2 BASIC14.66□□□□□ -0.06
CDC42SE2Q9NRR3 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDC42SE2Q9NRR3 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
CDC42SE2Q9NRR3 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDC42SE2Q9NRR3 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC14.66□□□□□ -0.06
CDC42SE2Q9NRR3 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC14.66□□□□□ -0.06
CDC42SE2Q9NRR3 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDC42SE2Q9NRR3 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
CDC42SE2Q9NRR3 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC14.66□□□□□ -0.06
CDC42SE2Q9NRR3 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC14.66□□□□□ -0.06
CDC42SE2Q9NRR3 KRT16P3-201ENST00000439127 1283 ntBASIC14.66□□□□□ -0.06
CDC42SE2Q9NRR3 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC14.66□□□□□ -0.06
CDC42SE2Q9NRR3 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC14.66□□□□□ -0.06
CDC42SE2Q9NRR3 MIR3181-201ENST00000578512 73 ntBASIC14.66□□□□□ -0.06
CDC42SE2Q9NRR3 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
CDC42SE2Q9NRR3 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDC42SE2Q9NRR3 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC14.66□□□□□ -0.06
CDC42SE2Q9NRR3 DYM-203ENST00000442713 2147 ntTSL 2 BASIC14.66□□□□□ -0.06
CDC42SE2Q9NRR3 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDC42SE2Q9NRR3 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
CDC42SE2Q9NRR3 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
CDC42SE2Q9NRR3 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC14.66□□□□□ -0.06
CDC42SE2Q9NRR3 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC14.66□□□□□ -0.06
CDC42SE2Q9NRR3 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC14.66□□□□□ -0.06
CDC42SE2Q9NRR3 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CDC42SE2Q9NRR3 AC073130.3-201ENST00000624389 2278 ntBASIC14.66□□□□□ -0.06
CDC42SE2Q9NRR3 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDC42SE2Q9NRR3 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
CDC42SE2Q9NRR3 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC14.65□□□□□ -0.06
CDC42SE2Q9NRR3 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC14.65□□□□□ -0.06
CDC42SE2Q9NRR3 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC14.65□□□□□ -0.06
CDC42SE2Q9NRR3 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC14.65□□□□□ -0.06
CDC42SE2Q9NRR3 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDC42SE2Q9NRR3 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CDC42SE2Q9NRR3 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDC42SE2Q9NRR3 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDC42SE2Q9NRR3 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDC42SE2Q9NRR3 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDC42SE2Q9NRR3 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
CDC42SE2Q9NRR3 AL034346.1-201ENST00000568244 1277 ntBASIC14.65□□□□□ -0.06
CDC42SE2Q9NRR3 AL356740.2-201ENST00000601559 647 ntBASIC14.65□□□□□ -0.06
CDC42SE2Q9NRR3 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDC42SE2Q9NRR3 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDC42SE2Q9NRR3 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CDC42SE2Q9NRR3 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDC42SE2Q9NRR3 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDC42SE2Q9NRR3 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDC42SE2Q9NRR3 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDC42SE2Q9NRR3 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDC42SE2Q9NRR3 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC14.64□□□□□ -0.07
CDC42SE2Q9NRR3 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
CDC42SE2Q9NRR3 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDC42SE2Q9NRR3 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDC42SE2Q9NRR3 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
CDC42SE2Q9NRR3 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CDC42SE2Q9NRR3 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDC42SE2Q9NRR3 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
CDC42SE2Q9NRR3 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDC42SE2Q9NRR3 AC092171.4-201ENST00000609130 632 ntBASIC14.64□□□□□ -0.07
CDC42SE2Q9NRR3 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDC42SE2Q9NRR3 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDC42SE2Q9NRR3 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC14.64□□□□□ -0.07
CDC42SE2Q9NRR3 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
CDC42SE2Q9NRR3 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDC42SE2Q9NRR3 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CDC42SE2Q9NRR3 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CDC42SE2Q9NRR3 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDC42SE2Q9NRR3 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDC42SE2Q9NRR3 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CDC42SE2Q9NRR3 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDC42SE2Q9NRR3 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
CDC42SE2Q9NRR3 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC14.63□□□□□ -0.07
CDC42SE2Q9NRR3 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
CDC42SE2Q9NRR3 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CDC42SE2Q9NRR3 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
CDC42SE2Q9NRR3 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CDC42SE2Q9NRR3 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC14.63□□□□□ -0.07
CDC42SE2Q9NRR3 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CDC42SE2Q9NRR3 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms