Protein–RNA interactions for Protein: Q96QR1

SCGB3A1, Secretoglobin family 3A member 1, humanhuman

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCGB3A1Q96QR1 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SCGB3A1Q96QR1 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
SCGB3A1Q96QR1 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC15.22■□□□□ 0.03
SCGB3A1Q96QR1 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
SCGB3A1Q96QR1 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SCGB3A1Q96QR1 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SCGB3A1Q96QR1 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SCGB3A1Q96QR1 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SCGB3A1Q96QR1 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SCGB3A1Q96QR1 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
SCGB3A1Q96QR1 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SCGB3A1Q96QR1 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
SCGB3A1Q96QR1 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
SCGB3A1Q96QR1 RARG-204ENST00000543726 1779 ntTSL 2 BASIC15.21■□□□□ 0.03
SCGB3A1Q96QR1 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SCGB3A1Q96QR1 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SCGB3A1Q96QR1 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
SCGB3A1Q96QR1 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SCGB3A1Q96QR1 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
SCGB3A1Q96QR1 AC022616.5-201ENST00000518796 181 ntBASIC15.21■□□□□ 0.03
SCGB3A1Q96QR1 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SCGB3A1Q96QR1 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
SCGB3A1Q96QR1 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SCGB3A1Q96QR1 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
SCGB3A1Q96QR1 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SCGB3A1Q96QR1 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC15.21■□□□□ 0.02
SCGB3A1Q96QR1 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.02
SCGB3A1Q96QR1 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
SCGB3A1Q96QR1 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
SCGB3A1Q96QR1 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
SCGB3A1Q96QR1 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.02
SCGB3A1Q96QR1 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
SCGB3A1Q96QR1 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
SCGB3A1Q96QR1 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC15.2■□□□□ 0.02
SCGB3A1Q96QR1 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SCGB3A1Q96QR1 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SCGB3A1Q96QR1 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC15.2■□□□□ 0.02
SCGB3A1Q96QR1 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SCGB3A1Q96QR1 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SCGB3A1Q96QR1 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
SCGB3A1Q96QR1 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
SCGB3A1Q96QR1 AL592293.1-201ENST00000502889 1188 ntBASIC15.2■□□□□ 0.02
SCGB3A1Q96QR1 CA15P2-201ENST00000611168 834 ntBASIC15.2■□□□□ 0.02
SCGB3A1Q96QR1 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SCGB3A1Q96QR1 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC15.2■□□□□ 0.02
SCGB3A1Q96QR1 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC15.2■□□□□ 0.02
SCGB3A1Q96QR1 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC15.2■□□□□ 0.02
SCGB3A1Q96QR1 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SCGB3A1Q96QR1 FP325331.1-202ENST00000623531 1380 ntBASIC15.2■□□□□ 0.02
SCGB3A1Q96QR1 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SCGB3A1Q96QR1 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
SCGB3A1Q96QR1 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SCGB3A1Q96QR1 FEM1AP1-201ENST00000431297 1995 ntBASIC15.2■□□□□ 0.02
SCGB3A1Q96QR1 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
SCGB3A1Q96QR1 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
SCGB3A1Q96QR1 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SCGB3A1Q96QR1 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
SCGB3A1Q96QR1 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC15.19■□□□□ 0.02
SCGB3A1Q96QR1 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
SCGB3A1Q96QR1 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC15.19■□□□□ 0.02
SCGB3A1Q96QR1 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SCGB3A1Q96QR1 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
SCGB3A1Q96QR1 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC15.19■□□□□ 0.02
SCGB3A1Q96QR1 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SCGB3A1Q96QR1 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
SCGB3A1Q96QR1 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
SCGB3A1Q96QR1 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SCGB3A1Q96QR1 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC15.19■□□□□ 0.02
SCGB3A1Q96QR1 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SCGB3A1Q96QR1 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
SCGB3A1Q96QR1 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
SCGB3A1Q96QR1 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SCGB3A1Q96QR1 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SCGB3A1Q96QR1 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SCGB3A1Q96QR1 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
SCGB3A1Q96QR1 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC15.19■□□□□ 0.02
SCGB3A1Q96QR1 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SCGB3A1Q96QR1 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SCGB3A1Q96QR1 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SCGB3A1Q96QR1 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SCGB3A1Q96QR1 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC15.18■□□□□ 0.02
SCGB3A1Q96QR1 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
SCGB3A1Q96QR1 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SCGB3A1Q96QR1 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SCGB3A1Q96QR1 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SCGB3A1Q96QR1 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SCGB3A1Q96QR1 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SCGB3A1Q96QR1 ADM-207ENST00000530439 1839 ntTSL 2 BASIC15.18■□□□□ 0.02
SCGB3A1Q96QR1 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
SCGB3A1Q96QR1 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SCGB3A1Q96QR1 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SCGB3A1Q96QR1 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC15.18■□□□□ 0.02
SCGB3A1Q96QR1 LSM7-203ENST00000585409 512 ntTSL 2 BASIC15.18■□□□□ 0.02
SCGB3A1Q96QR1 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SCGB3A1Q96QR1 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
SCGB3A1Q96QR1 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SCGB3A1Q96QR1 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC15.18■□□□□ 0.02
SCGB3A1Q96QR1 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
SCGB3A1Q96QR1 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SCGB3A1Q96QR1 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms