Protein–RNA interactions for Protein: Q96QF0

RAB3IP, Rab-3A-interacting protein, humanhuman

Predicted RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IPQ96QF0 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RAB3IPQ96QF0 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RAB3IPQ96QF0 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RAB3IPQ96QF0 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC20.78■□□□□ 0.92
RAB3IPQ96QF0 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC20.78■□□□□ 0.92
RAB3IPQ96QF0 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
RAB3IPQ96QF0 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC20.78■□□□□ 0.92
RAB3IPQ96QF0 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
RAB3IPQ96QF0 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
RAB3IPQ96QF0 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC20.78■□□□□ 0.92
RAB3IPQ96QF0 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC20.78■□□□□ 0.92
RAB3IPQ96QF0 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RAB3IPQ96QF0 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
RAB3IPQ96QF0 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC20.78■□□□□ 0.92
RAB3IPQ96QF0 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
RAB3IPQ96QF0 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RAB3IPQ96QF0 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
RAB3IPQ96QF0 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RAB3IPQ96QF0 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RAB3IPQ96QF0 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
RAB3IPQ96QF0 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RAB3IPQ96QF0 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RAB3IPQ96QF0 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RAB3IPQ96QF0 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RAB3IPQ96QF0 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RAB3IPQ96QF0 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
RAB3IPQ96QF0 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RAB3IPQ96QF0 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RAB3IPQ96QF0 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RAB3IPQ96QF0 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC20.77■□□□□ 0.92
RAB3IPQ96QF0 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
RAB3IPQ96QF0 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
RAB3IPQ96QF0 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
RAB3IPQ96QF0 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
RAB3IPQ96QF0 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
RAB3IPQ96QF0 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
RAB3IPQ96QF0 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
RAB3IPQ96QF0 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
RAB3IPQ96QF0 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RAB3IPQ96QF0 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RAB3IPQ96QF0 AFG3L1P-217ENST00000557444 2447 ntBASIC20.76■□□□□ 0.91
RAB3IPQ96QF0 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
RAB3IPQ96QF0 AC087289.5-201ENST00000586076 3175 ntBASIC20.76■□□□□ 0.91
RAB3IPQ96QF0 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC20.76■□□□□ 0.91
RAB3IPQ96QF0 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RAB3IPQ96QF0 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RAB3IPQ96QF0 TPT1-202ENST00000379055 948 ntTSL 2 BASIC20.76■□□□□ 0.91
RAB3IPQ96QF0 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RAB3IPQ96QF0 AC104564.3-201ENST00000582367 638 ntBASIC20.76■□□□□ 0.91
RAB3IPQ96QF0 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RAB3IPQ96QF0 SRP68-213ENST00000629930 165 ntTSL 5 BASIC20.76■□□□□ 0.91
RAB3IPQ96QF0 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC20.76■□□□□ 0.91
RAB3IPQ96QF0 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RAB3IPQ96QF0 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC20.76■□□□□ 0.91
RAB3IPQ96QF0 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RAB3IPQ96QF0 AP005212.1-201ENST00000581547 1997 ntBASIC20.76■□□□□ 0.91
RAB3IPQ96QF0 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC20.76■□□□□ 0.91
RAB3IPQ96QF0 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RAB3IPQ96QF0 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RAB3IPQ96QF0 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RAB3IPQ96QF0 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RAB3IPQ96QF0 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RAB3IPQ96QF0 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
RAB3IPQ96QF0 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC20.75■□□□□ 0.91
RAB3IPQ96QF0 LBH-205ENST00000407930 756 ntTSL 2 BASIC20.75■□□□□ 0.91
RAB3IPQ96QF0 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC20.75■□□□□ 0.91
RAB3IPQ96QF0 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
RAB3IPQ96QF0 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
RAB3IPQ96QF0 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC20.75■□□□□ 0.91
RAB3IPQ96QF0 AC138932.1-201ENST00000534164 6830 ntBASIC20.75■□□□□ 0.91
RAB3IPQ96QF0 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
RAB3IPQ96QF0 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
RAB3IPQ96QF0 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RAB3IPQ96QF0 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC20.75■□□□□ 0.91
RAB3IPQ96QF0 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
RAB3IPQ96QF0 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
RAB3IPQ96QF0 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RAB3IPQ96QF0 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC20.74■□□□□ 0.91
RAB3IPQ96QF0 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
RAB3IPQ96QF0 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC20.74■□□□□ 0.91
RAB3IPQ96QF0 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RAB3IPQ96QF0 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
RAB3IPQ96QF0 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RAB3IPQ96QF0 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC20.74■□□□□ 0.91
RAB3IPQ96QF0 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RAB3IPQ96QF0 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
RAB3IPQ96QF0 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC20.74■□□□□ 0.91
RAB3IPQ96QF0 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
RAB3IPQ96QF0 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC20.74■□□□□ 0.91
RAB3IPQ96QF0 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
RAB3IPQ96QF0 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RAB3IPQ96QF0 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RAB3IPQ96QF0 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC20.74■□□□□ 0.91
RAB3IPQ96QF0 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC20.74■□□□□ 0.91
RAB3IPQ96QF0 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC20.73■□□□□ 0.91
RAB3IPQ96QF0 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RAB3IPQ96QF0 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RAB3IPQ96QF0 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RAB3IPQ96QF0 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
RAB3IPQ96QF0 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms