Protein–RNA interactions for Protein: Q96PT4

DUX3, Putative double homeobox protein 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX3Q96PT4 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
DUX3Q96PT4 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
DUX3Q96PT4 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC16.55■□□□□ 0.24
DUX3Q96PT4 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
DUX3Q96PT4 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
DUX3Q96PT4 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC16.55■□□□□ 0.24
DUX3Q96PT4 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC16.55■□□□□ 0.24
DUX3Q96PT4 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
DUX3Q96PT4 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
DUX3Q96PT4 KRT19P1-201ENST00000405746 1186 ntBASIC16.55■□□□□ 0.24
DUX3Q96PT4 AC104187.1-201ENST00000607510 612 ntBASIC16.55■□□□□ 0.24
DUX3Q96PT4 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
DUX3Q96PT4 CPT2-209ENST00000636935 803 ntTSL 5 BASIC16.55■□□□□ 0.24
DUX3Q96PT4 C1orf229-201ENST00000623686 2258 ntBASIC16.55■□□□□ 0.24
DUX3Q96PT4 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
DUX3Q96PT4 GCA-201ENST00000233612 1694 ntTSL 2 BASIC16.55■□□□□ 0.24
DUX3Q96PT4 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC16.55■□□□□ 0.24
DUX3Q96PT4 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC16.55■□□□□ 0.24
DUX3Q96PT4 ESRRAP2-201ENST00000418437 1549 ntBASIC16.55■□□□□ 0.24
DUX3Q96PT4 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC16.55■□□□□ 0.24
DUX3Q96PT4 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
DUX3Q96PT4 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC16.54■□□□□ 0.24
DUX3Q96PT4 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
DUX3Q96PT4 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC16.54■□□□□ 0.24
DUX3Q96PT4 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
DUX3Q96PT4 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
DUX3Q96PT4 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
DUX3Q96PT4 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
DUX3Q96PT4 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC16.54■□□□□ 0.24
DUX3Q96PT4 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
DUX3Q96PT4 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
DUX3Q96PT4 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
DUX3Q96PT4 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
DUX3Q96PT4 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC16.54■□□□□ 0.24
DUX3Q96PT4 AC080038.1-201ENST00000611274 1154 ntBASIC16.54■□□□□ 0.24
DUX3Q96PT4 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
DUX3Q96PT4 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC16.54■□□□□ 0.24
DUX3Q96PT4 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
DUX3Q96PT4 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC16.54■□□□□ 0.24
DUX3Q96PT4 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
DUX3Q96PT4 AC137767.1-201ENST00000602918 1920 ntBASIC16.54■□□□□ 0.24
DUX3Q96PT4 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
DUX3Q96PT4 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
DUX3Q96PT4 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
DUX3Q96PT4 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
DUX3Q96PT4 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
DUX3Q96PT4 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
DUX3Q96PT4 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
DUX3Q96PT4 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
DUX3Q96PT4 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
DUX3Q96PT4 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
DUX3Q96PT4 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
DUX3Q96PT4 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
DUX3Q96PT4 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
DUX3Q96PT4 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
DUX3Q96PT4 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
DUX3Q96PT4 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
DUX3Q96PT4 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
DUX3Q96PT4 AC006015.1-201ENST00000429970 570 ntBASIC16.53■□□□□ 0.24
DUX3Q96PT4 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC16.53■□□□□ 0.24
DUX3Q96PT4 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC16.53■□□□□ 0.24
DUX3Q96PT4 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC16.53■□□□□ 0.24
DUX3Q96PT4 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
DUX3Q96PT4 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC16.53■□□□□ 0.24
DUX3Q96PT4 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
DUX3Q96PT4 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
DUX3Q96PT4 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
DUX3Q96PT4 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
DUX3Q96PT4 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
DUX3Q96PT4 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC16.52■□□□□ 0.24
DUX3Q96PT4 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC16.52■□□□□ 0.24
DUX3Q96PT4 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
DUX3Q96PT4 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
DUX3Q96PT4 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
DUX3Q96PT4 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
DUX3Q96PT4 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
DUX3Q96PT4 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC16.52■□□□□ 0.24
DUX3Q96PT4 HSCB-202ENST00000398941 955 ntTSL 2 BASIC16.52■□□□□ 0.24
DUX3Q96PT4 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
DUX3Q96PT4 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
DUX3Q96PT4 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC16.52■□□□□ 0.24
DUX3Q96PT4 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC16.52■□□□□ 0.24
DUX3Q96PT4 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
DUX3Q96PT4 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
DUX3Q96PT4 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
DUX3Q96PT4 KRT87P-202ENST00000534226 1464 ntBASIC16.52■□□□□ 0.23
DUX3Q96PT4 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC16.52■□□□□ 0.23
DUX3Q96PT4 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
DUX3Q96PT4 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
DUX3Q96PT4 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC16.52■□□□□ 0.23
DUX3Q96PT4 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
DUX3Q96PT4 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
DUX3Q96PT4 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
DUX3Q96PT4 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC16.51■□□□□ 0.23
DUX3Q96PT4 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
DUX3Q96PT4 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC16.51■□□□□ 0.23
DUX3Q96PT4 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC16.51■□□□□ 0.23
DUX3Q96PT4 SPI1-203ENST00000533030 661 ntTSL 2 BASIC16.51■□□□□ 0.23
DUX3Q96PT4 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
DUX3Q96PT4 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms