Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
AP1S3Q96PC3 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
AP1S3Q96PC3 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
AP1S3Q96PC3 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
AP1S3Q96PC3 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
AP1S3Q96PC3 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
AP1S3Q96PC3 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
AP1S3Q96PC3 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC16.07■□□□□ 0.16
AP1S3Q96PC3 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC16.07■□□□□ 0.16
AP1S3Q96PC3 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
AP1S3Q96PC3 RARRES2P2-201ENST00000394842 485 ntBASIC16.07■□□□□ 0.16
AP1S3Q96PC3 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
AP1S3Q96PC3 THA1P-201ENST00000590384 1145 ntBASIC16.07■□□□□ 0.16
AP1S3Q96PC3 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC16.07■□□□□ 0.16
AP1S3Q96PC3 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
AP1S3Q96PC3 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
AP1S3Q96PC3 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
AP1S3Q96PC3 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
AP1S3Q96PC3 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC16.07■□□□□ 0.16
AP1S3Q96PC3 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
AP1S3Q96PC3 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
AP1S3Q96PC3 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
AP1S3Q96PC3 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
AP1S3Q96PC3 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
AP1S3Q96PC3 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
AP1S3Q96PC3 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC16.06■□□□□ 0.16
AP1S3Q96PC3 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC16.06■□□□□ 0.16
AP1S3Q96PC3 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
AP1S3Q96PC3 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
AP1S3Q96PC3 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
AP1S3Q96PC3 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
AP1S3Q96PC3 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
AP1S3Q96PC3 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC16.06■□□□□ 0.16
AP1S3Q96PC3 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
AP1S3Q96PC3 USF2-207ENST00000595068 1612 ntTSL 5 BASIC16.06■□□□□ 0.16
AP1S3Q96PC3 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC16.06■□□□□ 0.16
AP1S3Q96PC3 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC16.06■□□□□ 0.16
AP1S3Q96PC3 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC16.06■□□□□ 0.16
AP1S3Q96PC3 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
AP1S3Q96PC3 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
AP1S3Q96PC3 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
AP1S3Q96PC3 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
AP1S3Q96PC3 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
AP1S3Q96PC3 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC16.06■□□□□ 0.16
AP1S3Q96PC3 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
AP1S3Q96PC3 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
AP1S3Q96PC3 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
AP1S3Q96PC3 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC16.06■□□□□ 0.16
AP1S3Q96PC3 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
AP1S3Q96PC3 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
AP1S3Q96PC3 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
AP1S3Q96PC3 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
AP1S3Q96PC3 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
AP1S3Q96PC3 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
AP1S3Q96PC3 AF131216.4-201ENST00000638924 1588 ntBASIC16.05■□□□□ 0.16
AP1S3Q96PC3 CROCCP1-201ENST00000426910 5675 ntBASIC16.05■□□□□ 0.16
AP1S3Q96PC3 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
AP1S3Q96PC3 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
AP1S3Q96PC3 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
AP1S3Q96PC3 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
AP1S3Q96PC3 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
AP1S3Q96PC3 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
AP1S3Q96PC3 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC16.05■□□□□ 0.16
AP1S3Q96PC3 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC16.05■□□□□ 0.16
AP1S3Q96PC3 MIR4281-201ENST00000580852 62 ntBASIC16.05■□□□□ 0.16
AP1S3Q96PC3 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
AP1S3Q96PC3 U85056.1-201ENST00000616429 682 ntBASIC16.05■□□□□ 0.16
AP1S3Q96PC3 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC16.05■□□□□ 0.16
AP1S3Q96PC3 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
AP1S3Q96PC3 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
AP1S3Q96PC3 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
AP1S3Q96PC3 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC16.05■□□□□ 0.16
AP1S3Q96PC3 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
AP1S3Q96PC3 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
AP1S3Q96PC3 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
AP1S3Q96PC3 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
AP1S3Q96PC3 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC16.04■□□□□ 0.16
AP1S3Q96PC3 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
AP1S3Q96PC3 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
AP1S3Q96PC3 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
AP1S3Q96PC3 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
AP1S3Q96PC3 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
AP1S3Q96PC3 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
AP1S3Q96PC3 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
AP1S3Q96PC3 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
AP1S3Q96PC3 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
AP1S3Q96PC3 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC16.04■□□□□ 0.16
AP1S3Q96PC3 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
AP1S3Q96PC3 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
AP1S3Q96PC3 AC144652.1-201ENST00000609974 1624 ntBASIC16.04■□□□□ 0.16
AP1S3Q96PC3 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
AP1S3Q96PC3 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
AP1S3Q96PC3 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
AP1S3Q96PC3 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
AP1S3Q96PC3 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
AP1S3Q96PC3 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
AP1S3Q96PC3 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
AP1S3Q96PC3 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
AP1S3Q96PC3 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
AP1S3Q96PC3 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms