Protein–RNA interactions for Protein: Q96M42

LINC00479, Putative uncharacterized protein encoded by LINC00479, humanhuman

Predictions only

Length 142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00479Q96M42 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
LINC00479Q96M42 CLTA-206ENST00000466396 695 ntTSL 2 BASIC16.25■□□□□ 0.19
LINC00479Q96M42 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
LINC00479Q96M42 AC104564.3-201ENST00000582367 638 ntBASIC16.25■□□□□ 0.19
LINC00479Q96M42 AC137630.3-201ENST00000607245 391 ntBASIC16.25■□□□□ 0.19
LINC00479Q96M42 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LINC00479Q96M42 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LINC00479Q96M42 PCDHAC2-203ENST00000615316 3011 ntBASIC16.25■□□□□ 0.19
LINC00479Q96M42 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC16.25■□□□□ 0.19
LINC00479Q96M42 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
LINC00479Q96M42 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
LINC00479Q96M42 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC16.25■□□□□ 0.19
LINC00479Q96M42 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LINC00479Q96M42 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
LINC00479Q96M42 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LINC00479Q96M42 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
LINC00479Q96M42 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LINC00479Q96M42 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC16.24■□□□□ 0.19
LINC00479Q96M42 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC16.24■□□□□ 0.19
LINC00479Q96M42 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LINC00479Q96M42 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC16.24■□□□□ 0.19
LINC00479Q96M42 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC16.24■□□□□ 0.19
LINC00479Q96M42 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC16.24■□□□□ 0.19
LINC00479Q96M42 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
LINC00479Q96M42 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LINC00479Q96M42 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
LINC00479Q96M42 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
LINC00479Q96M42 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
LINC00479Q96M42 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
LINC00479Q96M42 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
LINC00479Q96M42 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
LINC00479Q96M42 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LINC00479Q96M42 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
LINC00479Q96M42 AL391422.3-201ENST00000603791 2761 ntBASIC16.23■□□□□ 0.19
LINC00479Q96M42 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
LINC00479Q96M42 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
LINC00479Q96M42 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
LINC00479Q96M42 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC16.23■□□□□ 0.19
LINC00479Q96M42 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LINC00479Q96M42 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
LINC00479Q96M42 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC16.23■□□□□ 0.19
LINC00479Q96M42 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC16.23■□□□□ 0.19
LINC00479Q96M42 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
LINC00479Q96M42 AC103834.1-201ENST00000520383 144 ntBASIC16.23■□□□□ 0.19
LINC00479Q96M42 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC16.23■□□□□ 0.19
LINC00479Q96M42 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC16.23■□□□□ 0.19
LINC00479Q96M42 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
LINC00479Q96M42 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC16.23■□□□□ 0.19
LINC00479Q96M42 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
LINC00479Q96M42 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
LINC00479Q96M42 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
LINC00479Q96M42 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC16.23■□□□□ 0.19
LINC00479Q96M42 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC16.23■□□□□ 0.19
LINC00479Q96M42 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
LINC00479Q96M42 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
LINC00479Q96M42 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
LINC00479Q96M42 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LINC00479Q96M42 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
LINC00479Q96M42 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
LINC00479Q96M42 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LINC00479Q96M42 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LINC00479Q96M42 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LINC00479Q96M42 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC16.22■□□□□ 0.19
LINC00479Q96M42 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
LINC00479Q96M42 AC103724.3-201ENST00000564481 992 ntBASIC16.22■□□□□ 0.19
LINC00479Q96M42 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
LINC00479Q96M42 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC16.22■□□□□ 0.19
LINC00479Q96M42 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC16.22■□□□□ 0.19
LINC00479Q96M42 C17orf82-201ENST00000623772 1530 ntBASIC16.22■□□□□ 0.19
LINC00479Q96M42 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LINC00479Q96M42 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
LINC00479Q96M42 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC16.22■□□□□ 0.19
LINC00479Q96M42 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
LINC00479Q96M42 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC16.22■□□□□ 0.19
LINC00479Q96M42 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC16.22■□□□□ 0.19
LINC00479Q96M42 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC16.22■□□□□ 0.19
LINC00479Q96M42 AC007952.6-201ENST00000573168 2673 ntBASIC16.22■□□□□ 0.19
LINC00479Q96M42 AC003957.1-201ENST00000625108 2673 ntBASIC16.22■□□□□ 0.19
LINC00479Q96M42 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LINC00479Q96M42 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
LINC00479Q96M42 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LINC00479Q96M42 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC16.21■□□□□ 0.19
LINC00479Q96M42 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LINC00479Q96M42 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
LINC00479Q96M42 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LINC00479Q96M42 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LINC00479Q96M42 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC16.21■□□□□ 0.19
LINC00479Q96M42 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LINC00479Q96M42 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC16.21■□□□□ 0.19
LINC00479Q96M42 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LINC00479Q96M42 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LINC00479Q96M42 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
LINC00479Q96M42 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
LINC00479Q96M42 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
LINC00479Q96M42 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
LINC00479Q96M42 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC16.21■□□□□ 0.19
LINC00479Q96M42 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
LINC00479Q96M42 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC16.21■□□□□ 0.19
LINC00479Q96M42 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
LINC00479Q96M42 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms