Protein–RNA interactions for Protein: Q96KJ9

COX4I2, Cytochrome c oxidase subunit 4 isoform 2, mitochondrial, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COX4I2Q96KJ9 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
COX4I2Q96KJ9 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
COX4I2Q96KJ9 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
COX4I2Q96KJ9 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC19.63■□□□□ 0.73
COX4I2Q96KJ9 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
COX4I2Q96KJ9 AF131216.4-201ENST00000638924 1588 ntBASIC19.63■□□□□ 0.73
COX4I2Q96KJ9 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
COX4I2Q96KJ9 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC19.63■□□□□ 0.73
COX4I2Q96KJ9 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
COX4I2Q96KJ9 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC19.63■□□□□ 0.73
COX4I2Q96KJ9 AC024257.2-201ENST00000549699 147 ntBASIC19.63■□□□□ 0.73
COX4I2Q96KJ9 MIR6821-201ENST00000617625 74 ntBASIC19.63■□□□□ 0.73
COX4I2Q96KJ9 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
COX4I2Q96KJ9 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
COX4I2Q96KJ9 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
COX4I2Q96KJ9 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC19.63■□□□□ 0.73
COX4I2Q96KJ9 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC19.63■□□□□ 0.73
COX4I2Q96KJ9 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
COX4I2Q96KJ9 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
COX4I2Q96KJ9 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC19.63■□□□□ 0.73
COX4I2Q96KJ9 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
COX4I2Q96KJ9 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
COX4I2Q96KJ9 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
COX4I2Q96KJ9 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
COX4I2Q96KJ9 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC19.62■□□□□ 0.73
COX4I2Q96KJ9 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
COX4I2Q96KJ9 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
COX4I2Q96KJ9 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
COX4I2Q96KJ9 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC19.62■□□□□ 0.73
COX4I2Q96KJ9 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC19.62■□□□□ 0.73
COX4I2Q96KJ9 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
COX4I2Q96KJ9 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
COX4I2Q96KJ9 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC19.61■□□□□ 0.73
COX4I2Q96KJ9 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
COX4I2Q96KJ9 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
COX4I2Q96KJ9 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
COX4I2Q96KJ9 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
COX4I2Q96KJ9 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
COX4I2Q96KJ9 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
COX4I2Q96KJ9 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC19.61■□□□□ 0.73
COX4I2Q96KJ9 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
COX4I2Q96KJ9 SRD5A1P1-201ENST00000442297 786 ntBASIC19.61■□□□□ 0.73
COX4I2Q96KJ9 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
COX4I2Q96KJ9 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC19.61■□□□□ 0.73
COX4I2Q96KJ9 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
COX4I2Q96KJ9 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
COX4I2Q96KJ9 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
COX4I2Q96KJ9 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
COX4I2Q96KJ9 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC19.61■□□□□ 0.73
COX4I2Q96KJ9 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.61■□□□□ 0.73
COX4I2Q96KJ9 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
COX4I2Q96KJ9 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
COX4I2Q96KJ9 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC19.61■□□□□ 0.73
COX4I2Q96KJ9 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
COX4I2Q96KJ9 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
COX4I2Q96KJ9 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC19.6■□□□□ 0.73
COX4I2Q96KJ9 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
COX4I2Q96KJ9 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
COX4I2Q96KJ9 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC19.6■□□□□ 0.73
COX4I2Q96KJ9 SSSCA1-AS1-201ENST00000567594 614 ntBASIC19.6■□□□□ 0.73
COX4I2Q96KJ9 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
COX4I2Q96KJ9 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
COX4I2Q96KJ9 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
COX4I2Q96KJ9 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
COX4I2Q96KJ9 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
COX4I2Q96KJ9 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
COX4I2Q96KJ9 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
COX4I2Q96KJ9 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
COX4I2Q96KJ9 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
COX4I2Q96KJ9 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
COX4I2Q96KJ9 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
COX4I2Q96KJ9 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC19.59■□□□□ 0.73
COX4I2Q96KJ9 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
COX4I2Q96KJ9 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
COX4I2Q96KJ9 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
COX4I2Q96KJ9 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC19.59■□□□□ 0.73
COX4I2Q96KJ9 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC19.59■□□□□ 0.73
COX4I2Q96KJ9 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC19.59■□□□□ 0.73
COX4I2Q96KJ9 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC19.59■□□□□ 0.73
COX4I2Q96KJ9 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC19.59■□□□□ 0.73
COX4I2Q96KJ9 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
COX4I2Q96KJ9 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
COX4I2Q96KJ9 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
COX4I2Q96KJ9 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
COX4I2Q96KJ9 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
COX4I2Q96KJ9 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
COX4I2Q96KJ9 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC19.58■□□□□ 0.73
COX4I2Q96KJ9 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC19.58■□□□□ 0.73
COX4I2Q96KJ9 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
COX4I2Q96KJ9 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
COX4I2Q96KJ9 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
COX4I2Q96KJ9 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.58■□□□□ 0.73
COX4I2Q96KJ9 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
COX4I2Q96KJ9 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
COX4I2Q96KJ9 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
COX4I2Q96KJ9 GLI3-203ENST00000437480 451 ntTSL 2 BASIC19.58■□□□□ 0.72
COX4I2Q96KJ9 CLTA-206ENST00000466396 695 ntTSL 2 BASIC19.58■□□□□ 0.72
COX4I2Q96KJ9 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC19.58■□□□□ 0.72
COX4I2Q96KJ9 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
COX4I2Q96KJ9 AF213884.3-201ENST00000563833 479 ntBASIC19.58■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms